Ss1.1-Pig4-TMW8032P03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCCGCGCCTCGAGATCGACCACGACAAGAGAGCGTACTCCTTCTGCGGGACCATAGAG TACATGGCGCCCGAGGTGGTGAACCGGAGGGGACACACGCAGAGCGCGGACTGGTGGTCC TTCGGCGTGCTCATGTTCGAGATGCTCACGGGGTCCCTGCCGTTCCAGGGGAAGGACAGG AAGGAGACCATGGCCCTCGTCCTAAAAGCCAAGCTGGGCATGCCCCAGTTCCTCAGCGCG GAGGCCCAGAGTCTGCTCAGAGCCCTCTTCAAACGGAACCCCTGCAACCGGCTGGGTAAG ACCCCCTGAGCCCCCGGGGACCCTGGCGGTGCACCTGCTCAGACTCAGCACCCCCCTGGC TGCGCGGTTCACCACGTTCACTGATACCCAGAGGCCCTGACGTGGGGTGGAACTTCCGGC ACGTGTCGTCCGTGCTCCAAGGGTTCCCCGAAGTCACGGTCACTGCCAAGCACTGTGAGC GCTCGCTAACAGGCACCGTTTACACAAAACGGGGCCACTTACTTTTGGAAGTCCAGAAAC CAAAGACAGAACCGTTGACATGCTGCTTCTAGTTTAACCCCTCTCGAATTGAGAAATCTC AACATATGTTAAAGTTGAGATTTACAGGCGAGTTTTAACTCAGTGCTAATAAGTTTTCAA AGTTAACTCCTCGCGGAAGGTTCCCCACGATTTCCTCTCGGGGGCACGTCTCCTGCCGAC ACCACTGGGCTTTAACGACCCACGGGGACGCGGCCACTGAGCTCCTTGTCCGTCTGCCCG GTTGCTGCGCCTCCCACAGCCCCGGGAGACAGCCGGTCCTTGGCTCCAGTCCTTACACGG GGGCAGCCGAGAGCGGGGGGGGCTCGAAACACAGTTAAAACCAGGAGGTGGTTTTTTCTT TTTCTTCCCACGGGGGGCAAATACTGCAGCGTTCAGGGCTGCCCGGGGTGGACGCCCGTT CCCTGTCCATGAGAGGCCACATCAGTGCAACGTGTTGGCACTTTAGCAAAACCCGTCAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCCGCGCCTCGAGATCGACCACGACAAGAGAGCGTACTCCTTCTGCGGGACCATAGAG TACATGGCGCCCGAGGTGGTGAACCGGAGGGGACACACGCAGAGCGCGGACTGGTGGTCC TTCGGCGTGCTCATGTTCGAGATGCTCACGGGGTCCCTGCCGTTCCAGGGGAAGGACAGG AAGGAGACCATGGCCCTCGTCCTAAAAGCCAAGCTGGGCATGCCCCAGTTCCTCAGCGCG GAGGCCCAGAGTCTGCTCAGAGCCCTCTTCAAACGGAACCCCTGCAACCGGCTGGGTAAG ACCCCCTGAGCCCCCGGGGACCCTGGCGGTGCACCTGCTCAGACTCAGCACCCCCCTGGC TGCGCGGTTCACCACGTTCACTGATACCCAGAGGCCCTGACGTGGGGTGGAACTTCCGGC ACGTGTCGTCCGTGCTCCAAGGGTTCCCCGAAGTCACGGTCACTGCCAAGCACTGTGAGC GCTCGCTAACAGGCACCGTTTACACAAAACGGGGCCACTTACTTTTGGAAGTCCAGAAAC CAAAGACAGAACCGTTGACATGCTGCTTCTAGTTTAACCCCTCTCGAATTGAGAAATCTC AACATATGTTAAAGTTGAGATTTACAGGCGAGTTTTAACTCAGTGCTAATAAGTTTTCAA AGTTAACTCCTCGCGGAAGGTTCCCCACGATTTCCTCTCGGGGGCACGTCTCCTGCCGAC ACCACTGGGCTTTAACGACCCACGGGGACGCGGCCACTGAGCTCCTTGTCCGTCTGCCCG GTTGCTGCGCCTCCCACAGCCCCGGGAGACAGCCGGTCCTTGGCTCCAGTCCTTACACGG GGGCAGCCGAGAGCGGGGGGGGCTCGAAACACAGTTAAAACCAGGAGGTGGTTTTTTCTT TTTCTTCCCACGGGGGGCAAATACTGCAGCGTTCAGGGCTGCCCGGGGTGGACGCCCGTT CCCTGTCCATGAGAGGCCACATCAGTGCAACGTGTTGGCACTTTAGCAAAACCCGTCAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 16-151, gnl|bosTau2|chr9 (64216353-64216217) | |
| 16-151, gnl|canFam2|chr1 (57525425-57525607) | |
| 16-151, gnl|danRer3|chr17 (32491357-32491182) | |
| 16-151, gnl|dasNov1|scaffold_54085 (934-766) | |
| 16-151, gnl|echTel1|scaffold_49733 (7308-7456) | |
| 16-151, gnl|fr1|chrUn (55384140-55383967) | |
| 16-151, gnl|galGal2|chr3 (38897810-38897627) | |
| 16-151, gnl|hg17|chr6 (166882404-166882593) | |
| 16-151, gnl|Hg17|chr6 (166882526-166882405) | |
| 16-151, gnl|loxAfr1|scaffold_19913 (11379-11531) | |
| 16-151, gnl|mm7|chr17 (6795884-6795696) | |
| 16-151, gnl|Mm7|chr17 (6795760-6795885) | |
| 16-151, gnl|monDom2|scaffold_0 (35231015-35230864) | |
| 16-151, gnl|oryCun1|scaffold_141754 (855-1033) | |
| 16-151, gnl|panTro1|chr5 (171235965-171236154) | |
| 16-151, gnl|rheMac2|chr4 (163422240-163422429) | |
| 16-151, gnl|rn3|chr1 (47510485-47510297) | |
| 16-151, gnl|tetNig1|chr10 (6981951-6981790) | |
| 16-151, gnl|xenTro1|scaffold_1221 (118534-118368) | |
| 207-326, gnl|bosTau2|chr9 (64211118-64210999) | |
| 207-326, gnl|canFam2|chr1 (57515818-57515925) | |
| 207-326, gnl|danRer3|chr17 (32493268-32493159) | |
| 207-326, gnl|dasNov1|scaffold_46268 (4679-4571) | |
| 207-326, gnl|echTel1|scaffold_49733 (4036-4137) | |
| 207-326, gnl|fr1|chrUn (55384482-55384376) | |
| 207-326, gnl|galGal2|chr3 (38904059-38903962) | |
| 207-326, gnl|hg17|chr6 (166872719-166872829) | |
| 207-326, gnl|Hg17|chr6 (166872820-166872719) | |
| 207-326, gnl|loxAfr1|scaffold_122502 (568-678) | |
| 207-326, gnl|mm7|chr17 (6802137-6802027) | |
| 207-326, gnl|Mm7|chr4 (133243546-133243441) | |
| 207-326, gnl|monDom2|scaffold_91 (4196651-4196546) | |
| 207-326, gnl|oryCun1|scaffold_150409 (768-869) | |
| 207-326, gnl|panTro1|chr5 (171226219-171226329) | |
| 207-326, gnl|rheMac2|chr4 (163412042-163412152) | |
| 207-326, gnl|rn3|chr1 (47517399-47517289) | |
| 207-326, gnl|tetNig1|chr10 (6982314-6982217) | |
| 207-326, gnl|xenTro1|scaffold_98 (842232-842333) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-151, gnl|bosTau2|chr9 (64216353-64216217) | |
| 16-151, gnl|canFam2|chr1 (57525425-57525607) | |
| 16-151, gnl|danRer3|chr17 (32491357-32491182) | |
| 16-151, gnl|dasNov1|scaffold_54085 (934-766) | |
| 16-151, gnl|echTel1|scaffold_49733 (7308-7456) | |
| 16-151, gnl|fr1|chrUn (55384140-55383967) | |
| 16-151, gnl|galGal2|chr3 (38897810-38897627) | |
| 16-151, gnl|hg17|chr6 (166882404-166882593) | |
| 16-151, gnl|Hg17|chr6 (166882526-166882405) | |
| 16-151, gnl|loxAfr1|scaffold_19913 (11379-11531) | |
| 16-151, gnl|mm7|chr17 (6795884-6795696) | |
| 16-151, gnl|Mm7|chr17 (6795760-6795885) | |
| 16-151, gnl|monDom2|scaffold_0 (35231015-35230864) | |
| 16-151, gnl|oryCun1|scaffold_141754 (855-1033) | |
| 16-151, gnl|panTro1|chr5 (171235965-171236154) | |
| 16-151, gnl|rheMac2|chr4 (163422240-163422429) | |
| 16-151, gnl|rn3|chr1 (47510485-47510297) | |
| 16-151, gnl|tetNig1|chr10 (6981951-6981790) | |
| 16-151, gnl|xenTro1|scaffold_1221 (118534-118368) | |
| 207-326, gnl|bosTau2|chr9 (64211118-64210999) | |
| 207-326, gnl|canFam2|chr1 (57515818-57515925) | |
| 207-326, gnl|danRer3|chr17 (32493268-32493159) | |
| 207-326, gnl|dasNov1|scaffold_46268 (4679-4571) | |
| 207-326, gnl|echTel1|scaffold_49733 (4036-4137) | |
| 207-326, gnl|fr1|chrUn (55384482-55384376) | |
| 207-326, gnl|galGal2|chr3 (38904059-38903962) | |
| 207-326, gnl|hg17|chr6 (166872719-166872829) | |
| 207-326, gnl|Hg17|chr6 (166872820-166872719) | |
| 207-326, gnl|loxAfr1|scaffold_122502 (568-678) | |
| 207-326, gnl|mm7|chr17 (6802137-6802027) | |
| 207-326, gnl|Mm7|chr4 (133243546-133243441) | |
| 207-326, gnl|monDom2|scaffold_91 (4196651-4196546) | |
| 207-326, gnl|oryCun1|scaffold_150409 (768-869) | |
| 207-326, gnl|panTro1|chr5 (171226219-171226329) | |
| 207-326, gnl|rheMac2|chr4 (163412042-163412152) | |
| 207-326, gnl|rn3|chr1 (47517399-47517289) | |
| 207-326, gnl|tetNig1|chr10 (6982314-6982217) | |
| 207-326, gnl|xenTro1|scaffold_98 (842232-842333) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ctl (0.153069) |