Ss1.1-Pig4-TMW8033A16.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAGAGCAGTTGAATATGTCAAGCAAAATCCTCTGTATGACACAGAAAGATGCAAGGCAT TCCAGTGTGATCTGACTAAAGATGACCTTCTGGAACATGTGCCCCCAGAGTCCGTGGATG TTGTCACATTGATATTTGTGCTCTCTGCGGTTCATCCTGATAAGATGCGCTTGGTCTTAC AAAACATTTACAAGGTCTTAAAACCAGGCAAAAGTGTCTTGTTTCGCGACTATGGGCTTT ATGATCATGCCATGCTTAGGTTTAAAGCCGGCAGCAAACTGGCAGAAAACTTTTATGTTA GACAAGATGGAACCAGATCATATTTTTTCACCGATGGTTACGAAGAACAGGTGAACGAGT ACGTGTTTCGTGCAACAGTGAATAAAAAAGAAGGCCTGTGCGTGCAGAGGGTTTTCCTCC AGAGCAAGTTCCGAAAGTCTCCCAAGAACCCAGCTCCCATGACCCTGGGCCTGGACCACG AGTCCTGACCTTTCACAAGGTTGACATCTGTGCCTCCCCTTGAAAAGCAAAGTTTTATTT TTTGTATATTTTTGTATTTTAACCTTTTAAAATGAGTGTGTGTAATATTCATATTGAAAA GTATCCAGTCTGTGTTATGTTATAGGAATGTAAATAAAATTGCAAGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAGAGCAGTTGAATATGTCAAGCAAAATCCTCTGTATGACACAGAAAGATGCAAGGCAT TCCAGTGTGATCTGACTAAAGATGACCTTCTGGAACATGTGCCCCCAGAGTCCGTGGATG TTGTCACATTGATATTTGTGCTCTCTGCGGTTCATCCTGATAAGATGCGCTTGGTCTTAC AAAACATTTACAAGGTCTTAAAACCAGGCAAAAGTGTCTTGTTTCGCGACTATGGGCTTT ATGATCATGCCATGCTTAGGTTTAAAGCCGGCAGCAAACTGGCAGAAAACTTTTATGTTA GACAAGATGGAACCAGATCATATTTTTTCACCGATGGTTACGAAGAACAGGTGAACGAGT ACGTGTTTCGTGCAACAGTGAATAAAAAAGAAGGCCTGTGCGTGCAGAGGGTTTTCCTCC AGAGCAAGTTCCGAAAGTCTCCCAAGAACCCAGCTCCCATGACCCTGGGCCTGGACCACG AGTCCTGACCTTTCACAAGGTTGACATCTGTGCCTCCCCTTGAAAAGCAAAGTTTTATTT TTTGTATATTTTTGTATTTTAACCTTTTAAAATGAGTGTGTGTAATATTCATATTGAAAA GTATCCAGTCTGTGTTATGTTATAGGAATGTAAATAAAATTGCAAGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 19-196, gnl|bosTau2|chr1 (98814375-98814198) | |
| 19-196, gnl|canFam2|chr23 (30260710-30260500) | |
| 19-196, gnl|danRer3|chr16 (39962221-39962398) | |
| 19-196, gnl|dasNov1|scaffold_245197 (3650-3436) | |
| 19-196, gnl|echTel1|scaffold_310404 (162726-162940) | |
| 19-196, gnl|fr1|chrUn (191254514-191254312) | |
| 19-196, gnl|galGal2|chr2 (40511976-40511790) | |
| 19-196, gnl|hg17|chr3 (15432254-15432470) | |
| 19-196, gnl|Hg17|chr3 (15432458-15432281) | |
| 19-196, gnl|loxAfr1|scaffold_10204 (19531-19745) | |
| 19-196, gnl|mm7|chr14 (28917203-28917403) | |
| 19-196, gnl|Mm7|chr14 (28917393-28917216) | |
| 19-196, gnl|monDom2|scaffold_7 (71071179-71071399) | |
| 19-196, gnl|oryCun1|scaffold_153609 (2994-2792) | |
| 19-196, gnl|panTro1|chr2 (16047943-16048159) | |
| 19-196, gnl|rheMac2|chr2 (157744388-157744603) | |
| 19-196, gnl|rn3|chr16 (6931991-6932201) | |
| 19-196, gnl|tetNig1|chrUn_random (41385092-41385285) | |
| 19-196, gnl|xenTro1|scaffold_1228 (6803-6618) | |
| 336-584, gnl|bosTau2|chr1 (98805241-98804983) | |
| 336-584, gnl|Hg17|chr3 (15427919-15426659) | |
| 336-584, gnl|Mm7|chr14 (28909428-28909218) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 19-196, gnl|bosTau2|chr1 (98814375-98814198) | |
| 19-196, gnl|canFam2|chr23 (30260710-30260500) | |
| 19-196, gnl|danRer3|chr16 (39962221-39962398) | |
| 19-196, gnl|dasNov1|scaffold_245197 (3650-3436) | |
| 19-196, gnl|echTel1|scaffold_310404 (162726-162940) | |
| 19-196, gnl|fr1|chrUn (191254514-191254312) | |
| 19-196, gnl|galGal2|chr2 (40511976-40511790) | |
| 19-196, gnl|hg17|chr3 (15432254-15432470) | |
| 19-196, gnl|Hg17|chr3 (15432458-15432281) | |
| 19-196, gnl|loxAfr1|scaffold_10204 (19531-19745) | |
| 19-196, gnl|mm7|chr14 (28917203-28917403) | |
| 19-196, gnl|Mm7|chr14 (28917393-28917216) | |
| 19-196, gnl|monDom2|scaffold_7 (71071179-71071399) | |
| 19-196, gnl|oryCun1|scaffold_153609 (2994-2792) | |
| 19-196, gnl|panTro1|chr2 (16047943-16048159) | |
| 19-196, gnl|rheMac2|chr2 (157744388-157744603) | |
| 19-196, gnl|rn3|chr16 (6931991-6932201) | |
| 19-196, gnl|tetNig1|chrUn_random (41385092-41385285) | |
| 19-196, gnl|xenTro1|scaffold_1228 (6803-6618) | |
| 336-584, gnl|bosTau2|chr1 (98805241-98804983) | |
| 336-584, gnl|Hg17|chr3 (15427919-15426659) | |
| 336-584, gnl|Mm7|chr14 (28909428-28909218) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) | |
| rec (0.17307) | |
| sug (0.127291) |