Non-Coding RNA Search

Ss1.1-Pig4-TMW8033D19.3

Sequence:


               
               CATCGGAAGGGTCAGCACCTGGCCAGCCCGGCCGACATCCCCGTCTGCAGCTCACCAATG
AAAACGCGGAACTCCTCGGCGAGGGGCGGGGCCAGAGGGGCGGGGCGGGGTTTAGAGCCC
GTTCCTTGCAGGGGCAACGAGCCCGGCGCATGCGTGAGGCGGGGACTTTCCGGGACCAAG
TCAGCGGACCCCGCGTGACCCAGGAGCCTACGAGGAGGCTCCTTCGGTCTCCTGTCTACC
TAGCGGGCTAATTCGACCAGATTTCAGCACGGAGACGTGCACGAAACCTACAGGTCACGG
AGACCAAAAATAACTGGGGAGAGGAAGTGCAGCTCTGAGCTCACTGGAGCCCCACCAAGC
ACCCTTCTTCAGTGGGGCTGGAAACTTTTCCTCTGCACTCTAGTAACAAGCACTTCCTGA
CCACAATTTTTGATCTCATGGTGGGATAGACTAAAGAGACAAGCTGTGACCACCACTGGA
GCAATAAGCCCCTTCTACCCCACCAGCACCCAATTTCTCCAGTCTTACACAGCGCTATAG
GGCTCGGCTTCAAGATCTTTAGGACACTGACCTTGAAATGTGAGCTCAAGTGTTCATACC
GGACAAGTGGGCTGGGATGAGGAGGGAGGCTGGGTACTTTTCAAAAGCGTATTGAATCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCGGAAGGGTCAGCACCTGGCCAGCCCGGCCGACATCCCCGTCTGCAGCTCACCAATG
AAAACGCGGAACTCCTCGGCGAGGGGCGGGGCCAGAGGGGCGGGGCGGGGTTTAGAGCCC
GTTCCTTGCAGGGGCAACGAGCCCGGCGCATGCGTGAGGCGGGGACTTTCCGGGACCAAG
TCAGCGGACCCCGCGTGACCCAGGAGCCTACGAGGAGGCTCCTTCGGTCTCCTGTCTACC
TAGCGGGCTAATTCGACCAGATTTCAGCACGGAGACGTGCACGAAACCTACAGGTCACGG
AGACCAAAAATAACTGGGGAGAGGAAGTGCAGCTCTGAGCTCACTGGAGCCCCACCAAGC
ACCCTTCTTCAGTGGGGCTGGAAACTTTTCCTCTGCACTCTAGTAACAAGCACTTCCTGA
CCACAATTTTTGATCTCATGGTGGGATAGACTAAAGAGACAAGCTGTGACCACCACTGGA
GCAATAAGCCCCTTCTACCCCACCAGCACCCAATTTCTCCAGTCTTACACAGCGCTATAG
GGCTCGGCTTCAAGATCTTTAGGACACTGACCTTGAAATGTGAGCTCAAGTGTTCATACC
GGACAAGTGGGCTGGGATGAGGAGGGAGGCTGGGTACTTTTCAAAAGCGTATTGAATCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-286, gnl|bosTau2|chr19 (14693681-14693398)
               

               
               1-286, gnl|Hg17|chr17 (6880041-6879782)
               

               
               1-286, gnl|Mm7|chr11 (70302581-70302829)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-286, gnl|bosTau2|chr19 (14693681-14693398)
               

               
               1-286, gnl|Hg17|chr17 (6880041-6879782)
               

               
               1-286, gnl|Mm7|chr11 (70302581-70302829)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               col (0.195008)
               

               
               eye (0.170503)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               eye (0.170503)

	1-286, gnl\|bosTau2\|chr19 (14693681-14693398)
	1-286, gnl\|Hg17\|chr17 (6880041-6879782)
	1-286, gnl\|Mm7\|chr11 (70302581-70302829)