Ss1.1-Pig4-TMW8033E08.5
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ACAATGGCGCCAGTGAGGCCAGCCCCGAGGTGGCGGACGGGGAGTTTTGGGACACGTGGG
GAAGGCGTTTCACGGGTCGGATTCACAAACAAGAATGTGAAACAGAGGAGATGGCGACCT
AATCATCCTCAGGCCTTCGCGGGGAGCGTTCGCGAGGGACAAGGCTTTGCATTTCGAAGA
AAACTAAAGATTCAGCAGAATTACAAGAAATTGCTTTGGAGGAAAAAGGCAACTCAGACC
TCACAAGACTCCCAGTTCACAGATAAATACCCTGATCATCTGAAACATCTCTATTTAGCT
GAAGAGGAAAGACTCAGGAAGCAACTTAAAAAAGTTCACCCGTCTTTGTTAGAACGAGCT
GACCAGCCTCCGTCAGAAGAACAGGTTGATCGGCCTTTGCCAGAAGAGCCGTGTAGCACT
GACCAGGCCTTGTCTGAAGAACAGTGTAGCGTTGAGCAGCCTCAGCCAGAAGAACAGAGT
AACCTGAGAGTAAACTCCATTACTATTTCAAAGAAAAATAAAAAGAAAACATCAAATCAG
AAAGCACAGGAAGAATATGAGCGGATACAAGCTAAGCGTGCTGCCAAGAAACAAGAATTT
GAGAGGAGAAAACAAGAGAGAGAAGAAGCTCAAAGGCTCTATAAAAAGAAGAAAATGGAA
GTGTTCAAAATATTGAGCAAAAAGACTAAGAAGGGCCAACCAAACTTGAATTTACAAATG
GAGTATCTTCTTAAAAAAATACAGGAAAAACATTAAGTCGGACTTGTTGTCTGATTAGTC
AAGGGTTAAAATATCTGCTGGCTATTGAGTTCTTTTGTATATGTCCTGTTCCTCCTAACA
ACTAAATTTGTCAACAGAAACTGGATTGCTAAGCTATACTAAATATAAAAAGTCTAAATA
TTTTTTGATTTTGTAAAATAAAATTTTCTTTATATGTGAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACAATGGCGCCAGTGAGGCCAGCCCCGAGGTGGCGGACGGGGAGTTTTGGGACACGTGGG
GAAGGCGTTTCACGGGTCGGATTCACAAACAAGAATGTGAAACAGAGGAGATGGCGACCT
AATCATCCTCAGGCCTTCGCGGGGAGCGTTCGCGAGGGACAAGGCTTTGCATTTCGAAGA
AAACTAAAGATTCAGCAGAATTACAAGAAATTGCTTTGGAGGAAAAAGGCAACTCAGACC
TCACAAGACTCCCAGTTCACAGATAAATACCCTGATCATCTGAAACATCTCTATTTAGCT
GAAGAGGAAAGACTCAGGAAGCAACTTAAAAAAGTTCACCCGTCTTTGTTAGAACGAGCT
GACCAGCCTCCGTCAGAAGAACAGGTTGATCGGCCTTTGCCAGAAGAGCCGTGTAGCACT
GACCAGGCCTTGTCTGAAGAACAGTGTAGCGTTGAGCAGCCTCAGCCAGAAGAACAGAGT
AACCTGAGAGTAAACTCCATTACTATTTCAAAGAAAAATAAAAAGAAAACATCAAATCAG
AAAGCACAGGAAGAATATGAGCGGATACAAGCTAAGCGTGCTGCCAAGAAACAAGAATTT
GAGAGGAGAAAACAAGAGAGAGAAGAAGCTCAAAGGCTCTATAAAAAGAAGAAAATGGAA
GTGTTCAAAATATTGAGCAAAAAGACTAAGAAGGGCCAACCAAACTTGAATTTACAAATG
GAGTATCTTCTTAAAAAAATACAGGAAAAACATTAAGTCGGACTTGTTGTCTGATTAGTC
AAGGGTTAAAATATCTGCTGGCTATTGAGTTCTTTTGTATATGTCCTGTTCCTCCTAACA
ACTAAATTTGTCAACAGAAACTGGATTGCTAAGCTATACTAAATATAAAAAGTCTAAATA
TTTTTTGATTTTGTAAAATAAAATTTTCTTTATATGTGAAAAAAAAAA
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157-450, gnl|bosTau2|chr5 (9115210-9114908) |
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157-450, gnl|canFam2|chr15 (27378541-27378351) |
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157-450, gnl|dasNov1|scaffold_8775 (23252-23065) |
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157-450, gnl|echTel1|scaffold_320120 (44039-43849) |
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157-450, gnl|Hg17|chr12 (81253517-81253218) |
|
157-450, gnl|hg17|chr18 (56348176-56348362) |
|
157-450, gnl|loxAfr1|scaffold_7346 (17356-17167) |
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157-450, gnl|Mm7|chr10 (105303672-105303971) |
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157-450, gnl|mm7|chr18 (67393423-67393599) |
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157-450, gnl|monDom2|scaffold_186 (786524-786335) |
|
157-450, gnl|oryCun1|scaffold_111019 (1733-1950) |
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157-450, gnl|panTro1|chr17 (53233734-53233920) |
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157-450, gnl|rheMac2|chr7 (157909680-157909492) |
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157-450, gnl|rn3|chr18 (63596457-63596654) |
| |
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592-936, gnl|bosTau2|chr5 (9111889-9111543) |
|
592-936, gnl|Hg17|chr12 (81249562-81249233) |
|
592-936, gnl|Mm7|chr10 (105308145-105308463) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
157-450, gnl|bosTau2|chr5 (9115210-9114908) |
|
157-450, gnl|canFam2|chr15 (27378541-27378351) |
|
157-450, gnl|dasNov1|scaffold_8775 (23252-23065) |
|
157-450, gnl|echTel1|scaffold_320120 (44039-43849) |
|
157-450, gnl|Hg17|chr12 (81253517-81253218) |
|
157-450, gnl|hg17|chr18 (56348176-56348362) |
|
157-450, gnl|loxAfr1|scaffold_7346 (17356-17167) |
|
157-450, gnl|Mm7|chr10 (105303672-105303971) |
|
157-450, gnl|mm7|chr18 (67393423-67393599) |
|
157-450, gnl|monDom2|scaffold_186 (786524-786335) |
|
157-450, gnl|oryCun1|scaffold_111019 (1733-1950) |
|
157-450, gnl|panTro1|chr17 (53233734-53233920) |
|
157-450, gnl|rheMac2|chr7 (157909680-157909492) |
|
157-450, gnl|rn3|chr18 (63596457-63596654) |
| |
|
592-936, gnl|bosTau2|chr5 (9111889-9111543) |
|
592-936, gnl|Hg17|chr12 (81249562-81249233) |
|
592-936, gnl|Mm7|chr10 (105308145-105308463) |
|
gul (0.710353) |
|
cbe (0.478469) |
|
sin (0.349895) |
|
spc (0.340097) |
|
vin (0.332557) |
|
csk (0.281492) |
|
ste (0.270416) |
|
ret (0.257467) |
|
hea (0.204499) |
|
cmu (0.186393) |
|
sag (0.182715) |
|
fty (0.17584) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
lnt (0.142308) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
ssp (0.13552) |
|
kid (0.129735) |
|
ova (0.129132) |
|
thg (0.126791) |
|
ese (0.126502) |
|
tra (0.123092) |
|
ebs (0.118301) |
|
med (0.116252) |
|
gul (0.710353) |
|
cbe (0.478469) |
|
sin (0.349895) |
|
spc (0.340097) |
|
vin (0.332557) |
|
csk (0.281492) |
|
ste (0.270416) |
|
ret (0.257467) |
|
hea (0.204499) |
|
cmu (0.186393) |
|
sag (0.182715) |
|
fty (0.17584) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
lnt (0.142308) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
ssp (0.13552) |
|
kid (0.129735) |
|
ova (0.129132) |
|
thg (0.126791) |
|
ese (0.126502) |
|
tra (0.123092) |
|
ebs (0.118301) |
|
med (0.116252) |
