Ss1.1-Pig4-TMW8033E23.3
|
GGGCCTTGGGCGGTCCGCGGGCCCTCGTGACTCTCTTGCTTCCCGCTCCCCTCCGTCCCG
CGGCAGATGGCGGCTCCAGGACATCCTGCTCGGGAGACATCGGCTGCGCCAGGTCCAGGG
CACCCTACGTGCGGTGACGCCGCCTCCAGGGCCAAGAAACAAAAGAAGAGGAAGAAAGCC
CGAGATGGGACCTCTGTGGCGAGTGGAGGCGGGAAGGCCTTGGAAAAGCCGGCCCCAGAG
GAAGCCCCCCTAAGCGCGGAGGCCCAGGCGGAGCAGCTGGCCCGGGAACTGGCCTGGTGC
GTGGAGCAACTGGAGCTGGGGCTGAAGATGCAGAGACCCAGCCCTAAGCAGAAAGAGCAA
GCTCTTGGGGCAATCCGAATCCTGCGCAGCCAAAAAACCCCTTTGCCCCGGAAGAGGCAG
CTGATGCACTCCTTGTTTGGGGACTATCGGGCTCTGATGGAAGCCCAGTGGCGCGAGGCC
CTGCGGGCTCTAAGGACTGCAGCCCACTCAGCCCAGGTGCAGCCTGTAGGCGAGGCCACC
AGAAAGAAGAGCGGCAGGGTGTGCAGGCTTCGTCAGGCCGGGCGAGCTAAGGACACCAGT
GACACTCCTGATGAGTTTAGGTTCAATTTCTTTTAGCCTCTTCCCCATTCTGCCAACAGT
CCTCCCCGGGGTGATGGAGTGCAGAGCTTTTCCAGGAAGGCGCCGTCAGATGTGGGGTTG
CTCTGTCCCTGGCTGCTCGCTGGATCTGGTGCCATGGCTGTTGGGCGGATGTGAGACATG
CATGTTGGGTACTGACTGCCTCACAAGCACAGGACCCCATTTGTGGCTTTTCAGCTGAAA
TGTCCCTCCTGCTAGAGAGGGAGGTGCACTGGGAAGTGTCTCCATAAACTGCAGTGAGTG
TGCAGCGTGTCATAGGGCTGACTCAGGATGGAGGGCGTTGGCCATAAGGATTAGGGCCGA
AGCTGCACAGCTGTGCCCTGGGGCTCACTTACGAGAGGACGTCCTATCAGGTGGTGTAGA
GCTTCCTGCCGTTATGTTACCTCTCATTAATAAAGTGACTTCTTATAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGCCTTGGGCGGTCCGCGGGCCCTCGTGACTCTCTTGCTTCCCGCTCCCCTCCGTCCCG
CGGCAGATGGCGGCTCCAGGACATCCTGCTCGGGAGACATCGGCTGCGCCAGGTCCAGGG
CACCCTACGTGCGGTGACGCCGCCTCCAGGGCCAAGAAACAAAAGAAGAGGAAGAAAGCC
CGAGATGGGACCTCTGTGGCGAGTGGAGGCGGGAAGGCCTTGGAAAAGCCGGCCCCAGAG
GAAGCCCCCCTAAGCGCGGAGGCCCAGGCGGAGCAGCTGGCCCGGGAACTGGCCTGGTGC
GTGGAGCAACTGGAGCTGGGGCTGAAGATGCAGAGACCCAGCCCTAAGCAGAAAGAGCAA
GCTCTTGGGGCAATCCGAATCCTGCGCAGCCAAAAAACCCCTTTGCCCCGGAAGAGGCAG
CTGATGCACTCCTTGTTTGGGGACTATCGGGCTCTGATGGAAGCCCAGTGGCGCGAGGCC
CTGCGGGCTCTAAGGACTGCAGCCCACTCAGCCCAGGTGCAGCCTGTAGGCGAGGCCACC
AGAAAGAAGAGCGGCAGGGTGTGCAGGCTTCGTCAGGCCGGGCGAGCTAAGGACACCAGT
GACACTCCTGATGAGTTTAGGTTCAATTTCTTTTAGCCTCTTCCCCATTCTGCCAACAGT
CCTCCCCGGGGTGATGGAGTGCAGAGCTTTTCCAGGAAGGCGCCGTCAGATGTGGGGTTG
CTCTGTCCCTGGCTGCTCGCTGGATCTGGTGCCATGGCTGTTGGGCGGATGTGAGACATG
CATGTTGGGTACTGACTGCCTCACAAGCACAGGACCCCATTTGTGGCTTTTCAGCTGAAA
TGTCCCTCCTGCTAGAGAGGGAGGTGCACTGGGAAGTGTCTCCATAAACTGCAGTGAGTG
TGCAGCGTGTCATAGGGCTGACTCAGGATGGAGGGCGTTGGCCATAAGGATTAGGGCCGA
AGCTGCACAGCTGTGCCCTGGGGCTCACTTACGAGAGGACGTCCTATCAGGTGGTGTAGA
GCTTCCTGCCGTTATGTTACCTCTCATTAATAAAGTGACTTCTTATAA
|
|
gi|61402196|gb|AAH91734.1| |
Protein identifier
|
gi|61402196|gb|AAH91734.1| |
|
117-269, gnl|bosTau2|chr14 (3121859-3122005) |
|
117-269, gnl|Hg17|chr8 (146248904-146249089) |
|
117-269, gnl|Mm7|chr15 (77031965-77032135) |
| |
|
348-499, gnl|bosTau2|chr14 (3122420-3122570) |
|
348-499, gnl|Hg17|chr8 (146249483-146249633) |
|
348-499, gnl|Mm7|chr15 (77032754-77032904) |
| |
|
757-904, gnl|bosTau2|chr14 (3123103-3123243) |
|
757-904, gnl|canFam2|chr4 (20634357-20634081) |
|
757-904, gnl|dasNov1|scaffold_92212 (4304-4590) |
|
757-904, gnl|echTel1|scaffold_182989 (1457-1201) |
|
757-904, gnl|hg17|chr16 (45606045-45606305) |
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757-904, gnl|Hg17|chr8 (146250484-146250613) |
|
757-904, gnl|loxAfr1|scaffold_5440 (3977-3697) |
|
757-904, gnl|mm7|chr15 (77033588-77033810) |
|
757-904, gnl|oryCun1|scaffold_40637 (1353-1599) |
|
757-904, gnl|panTro1|chrUn_random (9371449-9371709) |
|
757-904, gnl|rheMac2|chr20 (45226497-45226758) |
|
757-904, gnl|rn3|chr7 (115045909-115046116) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
117-269, gnl|bosTau2|chr14 (3121859-3122005) |
|
117-269, gnl|Hg17|chr8 (146248904-146249089) |
|
117-269, gnl|Mm7|chr15 (77031965-77032135) |
| |
|
348-499, gnl|bosTau2|chr14 (3122420-3122570) |
|
348-499, gnl|Hg17|chr8 (146249483-146249633) |
|
348-499, gnl|Mm7|chr15 (77032754-77032904) |
| |
|
757-904, gnl|bosTau2|chr14 (3123103-3123243) |
|
757-904, gnl|canFam2|chr4 (20634357-20634081) |
|
757-904, gnl|dasNov1|scaffold_92212 (4304-4590) |
|
757-904, gnl|echTel1|scaffold_182989 (1457-1201) |
|
757-904, gnl|hg17|chr16 (45606045-45606305) |
|
757-904, gnl|Hg17|chr8 (146250484-146250613) |
|
757-904, gnl|loxAfr1|scaffold_5440 (3977-3697) |
|
757-904, gnl|mm7|chr15 (77033588-77033810) |
|
757-904, gnl|oryCun1|scaffold_40637 (1353-1599) |
|
757-904, gnl|panTro1|chrUn_random (9371449-9371709) |
|
757-904, gnl|rheMac2|chr20 (45226497-45226758) |
|
757-904, gnl|rn3|chr7 (115045909-115046116) |
|
fty (0.351679) |
|
cga (0.279096) |
|
ecc (0.23007) |
|
ece (0.229305) |
|
jej (0.197844) |
|
fcc (0.197785) |
|
ill (0.175593) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
hyp (0.142837) |
|
che (0.136314) |
|
ste (0.135208) |
|
eep (0.122564) |
|
pgl (0.118483) |
|
med (0.116252) |
|
fty (0.351679) |
|
cga (0.279096) |
|
ecc (0.23007) |
|
ece (0.229305) |
|
jej (0.197844) |
|
fcc (0.197785) |
|
ill (0.175593) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
hyp (0.142837) |
|
che (0.136314) |
|
ste (0.135208) |
|
eep (0.122564) |
|
pgl (0.118483) |
|
med (0.116252) |
