Ss1.1-Pig4-TMW8033G13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGATAAGCACGAGATAGACCGAATGACGCTCACCATGAATGTGGAACTTCCAGACATCT TCTCCCCTGAGCTGAAGTCCCTCCTGGAAAGCTTGCTCCAGCGCGACGTTAGTAAGCGAC TCGGCTGCCACGGAGGCGGTGCACAGGAGCTAAAAGCGCATGATTTTTTCAGAGGCATCG ACTGGCAGCACGTCTACCTGCAGAAGTACCCTCCACCCTTGATTCCTCCTCGGGGAGAAG TCAATGCTGCTGACGCCTTTGACATCGGCTCATTTGATGAAGAGGATACCAAAGGCATCA AGCTTCTTGATTGCGACCAAGAACTCTACAAGAACTTCCCTCTGGTGATCTCCGAGCGCT GGCAGCAGGAAGTGGCGGAAACAGTTTACGAAGCAGTAAATGCAGACACGGATAAAATAG AGGCCAGGAAGAGAGCTAAAAATAAGCAACTTGGCCATGAAGAAGATTACGCTCTGGGAA GAGACTGCATCATGCACGGGTACATGCTGAAGCTGGGAAACCCGTTCCTGACTCAGTGGC AGCGTCGCTATTTTTACCTCTTTCCAAACAGACTTGAATGGAGAGGCGAGGGCGAGTCCC GACAAAATTTACTGACAATGGAACAGATTCTGTCCGTGGAAGAAACTCAGATTAAAGACA AAAAATGCATTTTGTTGAGGATAAAAGGAGGGAAGCAATTTGTCTTGCAGTGTGAGAGCG ACCCCGAGTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGATAAGCACGAGATAGACCGAATGACGCTCACCATGAATGTGGAACTTCCAGACATCT TCTCCCCTGAGCTGAAGTCCCTCCTGGAAAGCTTGCTCCAGCGCGACGTTAGTAAGCGAC TCGGCTGCCACGGAGGCGGTGCACAGGAGCTAAAAGCGCATGATTTTTTCAGAGGCATCG ACTGGCAGCACGTCTACCTGCAGAAGTACCCTCCACCCTTGATTCCTCCTCGGGGAGAAG TCAATGCTGCTGACGCCTTTGACATCGGCTCATTTGATGAAGAGGATACCAAAGGCATCA AGCTTCTTGATTGCGACCAAGAACTCTACAAGAACTTCCCTCTGGTGATCTCCGAGCGCT GGCAGCAGGAAGTGGCGGAAACAGTTTACGAAGCAGTAAATGCAGACACGGATAAAATAG AGGCCAGGAAGAGAGCTAAAAATAAGCAACTTGGCCATGAAGAAGATTACGCTCTGGGAA GAGACTGCATCATGCACGGGTACATGCTGAAGCTGGGAAACCCGTTCCTGACTCAGTGGC AGCGTCGCTATTTTTACCTCTTTCCAAACAGACTTGAATGGAGAGGCGAGGGCGAGTCCC GACAAAATTTACTGACAATGGAACAGATTCTGTCCGTGGAAGAAACTCAGATTAAAGACA AAAAATGCATTTTGTTGAGGATAAAAGGAGGGAAGCAATTTGTCTTGCAGTGTGAGAGCG ACCCCGAGTTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 34-137, gnl|bosTau2|chr17 (40248915-40248812) | |
| 34-137, gnl|Hg17|chr22 (24424625-24424728) | |
| 34-137, gnl|Mm7|chr5 (112115264-112115161) | |
| 299-465, gnl|bosTau2|chr17 (40243829-40243663) | |
| 299-465, gnl|canFam2|chr26 (22529976-22530174) | |
| 299-465, gnl|danRer3|chr19 (34906357-34906175) | |
| 299-465, gnl|dasNov1|scaffold_6302 (15869-16067) | |
| 299-465, gnl|echTel1|scaffold_53427 (3272-3455) | |
| 299-465, gnl|fr1|chrUn (227254034-227254203) | |
| 299-465, gnl|galGal2|chr15 (7004359-7004533) | |
| 299-465, gnl|hg17|chr22 (24434913-24435111) | |
| 299-465, gnl|Hg17|chr22 (24434925-24435091) | |
| 299-465, gnl|loxAfr1|scaffold_3648 (25883-25686) | |
| 299-465, gnl|mm7|chr5 (112106690-112106507) | |
| 299-465, gnl|Mm7|chr5 (112106677-112106511) | |
| 299-465, gnl|monDom2|scaffold_151 (519712-519907) | |
| 299-465, gnl|panTro1|chr23 (24517486-24517684) | |
| 299-465, gnl|rheMac2|chr10 (69535886-69536084) | |
| 299-465, gnl|rn3|chrUn (51681629-51681435) | |
| 299-465, gnl|tetNig1|chrUn_random (413644-413475) | |
| 299-465, gnl|xenTro1|scaffold_9 (1283379-1283563) | |
| 603-716, gnl|bosTau2|chr17 (40238484-40238371) | |
| 603-716, gnl|canFam2|chr26 (22535312-22535429) | |
| 603-716, gnl|danRer3|chr19 (34870803-34870690) | |
| 603-716, gnl|dasNov1|scaffold_6302 (20222-20337) | |
| 603-716, gnl|echTel1|scaffold_166801 (1402-1304) | |
| 603-716, gnl|fr1|chrUn (227255205-227255316) | |
| 603-716, gnl|galGal2|chr15 (7006182-7006295) | |
| 603-716, gnl|hg17|chr22 (24441768-24441885) | |
| 603-716, gnl|Hg17|chr22 (24441805-24441918) | |
| 603-716, gnl|loxAfr1|scaffold_44300 (13893-13815) | |
| 603-716, gnl|mm7|chr5 (112102702-112102588) | |
| 603-716, gnl|Mm7|chr5 (112102666-112102553) | |
| 603-716, gnl|monDom2|scaffold_151 (529440-529560) | |
| 603-716, gnl|oryCun1|scaffold_178167 (35017-34891) | |
| 603-716, gnl|panTro1|chr23 (24524331-24524448) | |
| 603-716, gnl|rheMac2|chr10 (69543019-69543135) | |
| 603-716, gnl|rn3|chrUn (51677917-51677803) | |
| 603-716, gnl|tetNig1|chrUn_random (412446-412365) | |
| 603-716, gnl|xenTro1|scaffold_9 (1288634-1288753) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 34-137, gnl|bosTau2|chr17 (40248915-40248812) | |
| 34-137, gnl|Hg17|chr22 (24424625-24424728) | |
| 34-137, gnl|Mm7|chr5 (112115264-112115161) | |
| 299-465, gnl|bosTau2|chr17 (40243829-40243663) | |
| 299-465, gnl|canFam2|chr26 (22529976-22530174) | |
| 299-465, gnl|danRer3|chr19 (34906357-34906175) | |
| 299-465, gnl|dasNov1|scaffold_6302 (15869-16067) | |
| 299-465, gnl|echTel1|scaffold_53427 (3272-3455) | |
| 299-465, gnl|fr1|chrUn (227254034-227254203) | |
| 299-465, gnl|galGal2|chr15 (7004359-7004533) | |
| 299-465, gnl|hg17|chr22 (24434913-24435111) | |
| 299-465, gnl|Hg17|chr22 (24434925-24435091) | |
| 299-465, gnl|loxAfr1|scaffold_3648 (25883-25686) | |
| 299-465, gnl|mm7|chr5 (112106690-112106507) | |
| 299-465, gnl|Mm7|chr5 (112106677-112106511) | |
| 299-465, gnl|monDom2|scaffold_151 (519712-519907) | |
| 299-465, gnl|panTro1|chr23 (24517486-24517684) | |
| 299-465, gnl|rheMac2|chr10 (69535886-69536084) | |
| 299-465, gnl|rn3|chrUn (51681629-51681435) | |
| 299-465, gnl|tetNig1|chrUn_random (413644-413475) | |
| 299-465, gnl|xenTro1|scaffold_9 (1283379-1283563) | |
| 603-716, gnl|bosTau2|chr17 (40238484-40238371) | |
| 603-716, gnl|canFam2|chr26 (22535312-22535429) | |
| 603-716, gnl|danRer3|chr19 (34870803-34870690) | |
| 603-716, gnl|dasNov1|scaffold_6302 (20222-20337) | |
| 603-716, gnl|echTel1|scaffold_166801 (1402-1304) | |
| 603-716, gnl|fr1|chrUn (227255205-227255316) | |
| 603-716, gnl|galGal2|chr15 (7006182-7006295) | |
| 603-716, gnl|hg17|chr22 (24441768-24441885) | |
| 603-716, gnl|Hg17|chr22 (24441805-24441918) | |
| 603-716, gnl|loxAfr1|scaffold_44300 (13893-13815) | |
| 603-716, gnl|mm7|chr5 (112102702-112102588) | |
| 603-716, gnl|Mm7|chr5 (112102666-112102553) | |
| 603-716, gnl|monDom2|scaffold_151 (529440-529560) | |
| 603-716, gnl|oryCun1|scaffold_178167 (35017-34891) | |
| 603-716, gnl|panTro1|chr23 (24524331-24524448) | |
| 603-716, gnl|rheMac2|chr10 (69543019-69543135) | |
| 603-716, gnl|rn3|chrUn (51677917-51677803) | |
| 603-716, gnl|tetNig1|chrUn_random (412446-412365) | |
| 603-716, gnl|xenTro1|scaffold_9 (1288634-1288753) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |