Non-Coding RNA Search

Ss1.1-Pig4-TMW8033I15.3

Sequence:


               
               TTTTTTTTTACATCTACAATAAATTATTTAAATTATTTCACAACAAGGGAGAGGGATAGG
TAATTTTTATCAGATATTTTTTTAAGCCATTTTTTAAAATTACATTTTTGGTCTTGACTG
ATGAAGTGGAACTCGCCCAGCCTTTGCGGGGCCCTCAGGCTCAGGGCAAGCAGAATATGT
ACTCATCTCCTTACTCCATGCCCTAAGAGCCCCCTGCCTGTTGACTCAGGACCTTTCTGA
GAATGAAGACAGCATTGGGAGATGAGCTTTGGGGTGTATCCACCTCAGCTCTACAATCAT
TGGGATTGTATCATAGAGGGAAGCGGGAAGTCAGAAATCGATCTATGCTTTTAATAAGAA
ACCGTGCCTGAAACAGTTTGATTGTTTTAATGTTGTTTCTGAAATTCCTTGTACCTTTGT
TAAAAAAAAAAATAAAAGTGAAAATAAATAGATGTGGAATTGTGCAATGGAAAGAAGGTA
ACAAAATAATAAGAAGAGATGTTTATTGACTTGATCAATATGATACTAATTTAGAATATT
TGAAATAAGATCCATGATACGTCATCATATCTGTCACACAATCACCCTTATTTTCATTAA
AGTTTGTTGATAAAAGTTGTTGAGAATATTTTCGTTTCAATCAGTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTACATCTACAATAAATTATTTAAATTATTTCACAACAAGGGAGAGGGATAGG
TAATTTTTATCAGATATTTTTTTAAGCCATTTTTTAAAATTACATTTTTGGTCTTGACTG
ATGAAGTGGAACTCGCCCAGCCTTTGCGGGGCCCTCAGGCTCAGGGCAAGCAGAATATGT
ACTCATCTCCTTACTCCATGCCCTAAGAGCCCCCTGCCTGTTGACTCAGGACCTTTCTGA
GAATGAAGACAGCATTGGGAGATGAGCTTTGGGGTGTATCCACCTCAGCTCTACAATCAT
TGGGATTGTATCATAGAGGGAAGCGGGAAGTCAGAAATCGATCTATGCTTTTAATAAGAA
ACCGTGCCTGAAACAGTTTGATTGTTTTAATGTTGTTTCTGAAATTCCTTGTACCTTTGT
TAAAAAAAAAAATAAAAGTGAAAATAAATAGATGTGGAATTGTGCAATGGAAAGAAGGTA
ACAAAATAATAAGAAGAGATGTTTATTGACTTGATCAATATGATACTAATTTAGAATATT
TGAAATAAGATCCATGATACGTCATCATATCTGTCACACAATCACCCTTATTTTCATTAA
AGTTTGTTGATAAAAGTTGTTGAGAATATTTTCGTTTCAATCAGTGCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-492, gnl|bosTau2|chr9 (31786118-31785634)
               

               
               1-492, gnl|Hg17|chr9 (97963361-97962834)
               

               
               1-492, gnl|Mm7|chr4 (46551416-46550902)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-492, gnl|bosTau2|chr9 (31786118-31785634)
               

               
               1-492, gnl|Hg17|chr9 (97963361-97962834)
               

               
               1-492, gnl|Mm7|chr4 (46551416-46550902)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

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               sin (0.349895)
               

               
               duo (0.345602)
               

               
               ill (0.175593)
               

               
               rec (0.17307)
               

               
               cje (0.165235)
               

               
               pty (0.142714)
               

               
               jej (0.0989218)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.349895)
               

               
               duo (0.345602)
               

               
               ill (0.175593)
               

               
               rec (0.17307)
               

               
               cje (0.165235)
               

               
               pty (0.142714)
               

               
               jej (0.0989218)

	1-492, gnl\|bosTau2\|chr9 (31786118-31785634)
	1-492, gnl\|Hg17\|chr9 (97963361-97962834)
	1-492, gnl\|Mm7\|chr4 (46551416-46550902)

	sin (0.349895)
	duo (0.345602)
	ill (0.175593)
	rec (0.17307)
	cje (0.165235)
	pty (0.142714)
	jej (0.0989218)