Non-Coding RNA Search

Ss1.1-Pig4-TMW8033K08.5

Sequence:


               
               TTTACCAGTAGATCCAGTCTCTGTTATCATCAGAGAGCTCACATTGGAGAAAGGCCTTAT
ATATGTAGTGAATGTGGGAAAGCTTTTACTCGTAGCTTCAGTCTCCATTATCATAAGAGT
GTTCACACTGGAGAAAGGCCTTTTAAGTGCAGTGAATGTGGGAAATCTTTTATTAACATC
TCCAAATTGCATTGTCATCGGAGAGGTCATACTGGAGAAAAGTCTTAAGAGTGCACTAGT
GGGAAATCTTTTATGGGTAAATCTTTCTGAATGTTGGAGAGTTTAAACTGGGGAAAGATT
TACAGAGAATGTGCAATTTCCTTGTTCAGTATACAAATGCTGGAGGGAACTGGGAGGACA
TCTGTCTCAATTGAGTCTCAATCCAAGTGTGTCTGAAATCAGCATGATTTTTTCTCCTTA
CTCAGATCAGAAATTAGAGTTTTCAGGCGCTGTTGAAGGGCATACATCCTCCAGGTCTAC
AAAAAGGCATTTCCTGACCTCCAGAGTTCTTCAAAACAATGTCACTTGTTGTAAGACCAT
TGTGTCCAGGGGAAACTATAATTGATATAGAAACTCTGTTTTAATAAGGAGTGGAGGAAA
CTGCAGTTAGATGGAACCCATTCTAAAGGTGCATCTAGATGTTTCTATGACGTTGTCTGT
GGGATCAGCTTATACACAAATATCTAAACCTCCAGATACAATATTAACTTTTAGCTGGAG
TCATTGTCAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTACCAGTAGATCCAGTCTCTGTTATCATCAGAGAGCTCACATTGGAGAAAGGCCTTAT
ATATGTAGTGAATGTGGGAAAGCTTTTACTCGTAGCTTCAGTCTCCATTATCATAAGAGT
GTTCACACTGGAGAAAGGCCTTTTAAGTGCAGTGAATGTGGGAAATCTTTTATTAACATC
TCCAAATTGCATTGTCATCGGAGAGGTCATACTGGAGAAAAGTCTTAAGAGTGCACTAGT
GGGAAATCTTTTATGGGTAAATCTTTCTGAATGTTGGAGAGTTTAAACTGGGGAAAGATT
TACAGAGAATGTGCAATTTCCTTGTTCAGTATACAAATGCTGGAGGGAACTGGGAGGACA
TCTGTCTCAATTGAGTCTCAATCCAAGTGTGTCTGAAATCAGCATGATTTTTTCTCCTTA
CTCAGATCAGAAATTAGAGTTTTCAGGCGCTGTTGAAGGGCATACATCCTCCAGGTCTAC
AAAAAGGCATTTCCTGACCTCCAGAGTTCTTCAAAACAATGTCACTTGTTGTAAGACCAT
TGTGTCCAGGGGAAACTATAATTGATATAGAAACTCTGTTTTAATAAGGAGTGGAGGAAA
CTGCAGTTAGATGGAACCCATTCTAAAGGTGCATCTAGATGTTTCTATGACGTTGTCTGT
GGGATCAGCTTATACACAAATATCTAAACCTCCAGATACAATATTAACTTTTAGCTGGAG
TCATTGTCAGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-297, gnl|bosTau2|chr18 (55018255-55018559)
               

               
               1-297, gnl|Hg17|chr1 (183279579-183279874)
               

               
               1-297, gnl|Mm7|chr7 (20893312-20893616)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-297, gnl|bosTau2|chr18 (55018255-55018559)
               

               
               1-297, gnl|Hg17|chr1 (183279579-183279874)
               

               
               1-297, gnl|Mm7|chr7 (20893312-20893616)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	1-297, gnl\|bosTau2\|chr18 (55018255-55018559)
	1-297, gnl\|Hg17\|chr1 (183279579-183279874)
	1-297, gnl\|Mm7\|chr7 (20893312-20893616)