Non-Coding RNA Search

Ss1.1-Pig4-TMW8033L23.3

Sequence:


               
               TTTTTTTTTTTTGAAAATCTTAAAACTTTATTACATTGTTTCACCATTATATTTATTGTA
CACATAACTATTACTAAAGGTCACTTTACAGGGGGCTGCAAAATGGCCTGAAATTTTAGC
ACCACCCATTTTATACAAGATTTTTTTTTCCCCACAGAATTAATCACAGATTAGGAAAAT
CATTTCAACTAAAAATGTTGGTGAGGTGGTGAAGATATCCTTTTATAAAGTGCAATGTCA
AAAGAGTACTTGAGAAGGCAGGATTCAAGTCCCAGACTTAACATTGCCTAAGGGAAAGAT
AGGGATTTCAAGATACATCTCTAACCTTCTAAATATGGCACTGTAGATGTACCATTACTC
AGCACTCCAGAGAATTACGAATGATATTGGAAGAGACAGTGTTGAATTGGTGGGTAGGTT
GGCCAAGGAGGGTGAAGGGGGACCAGTTCTAATAGTCCTCAACTCCACTCCAGCTGTTCC
TGTTTCATACTGTCCGCCGAGCTGGTCCAGTCCCCTTCACCCAGTGTGTGACCAAAGGCA
GCTTCAAGGCTCAATGGCAAGAGACCACCTATAACCTCTTCACCTTCTGCTGCCTCTTTC
TGCTGCCACTGACTGTCATGACCATCTGCTATAGCCGCATTGTCCTCAGTGTGTCCAGTC
CCCGGACAAGGAAGGGGAATGATGGTGAGACCCCAATCCCCAGGCCCTAACCCATACCCT
AAAGCTATTGCCTCTAACCTCATTAATTGGATTAACTATCTATCAAACCACAAGTGAGAT
ACTTACCATATCTCTAGCACCTGATGCTGCACATTTTATAGAATGCCTTCAATTCTAACC
AGTCACTAGCCATCATTCTCTTGAGTCAGCTGGGCAAGAATTAAGGAGAAAGGTGATCAG
TATTCTCCTTTGCTCCTGGACACCAACAAGTCTTCAAGTAGACTTCAAATAGCTTCATGT
AACACAGCACCTTGATCAAAACTTTTTTAAAAAACTTTTTTCCAGCATGTCTGTCATAAT
CCCTGGTGGGAGGAGACCATATAGTCCATATAGTCCCAGTCTGTAGGGGGAGAGGTCTGC
TTCACTATTTCTACCCTTCCATCAATTCAGAAGCTGAGTGGTTCTGAACTTGGGTGTTAT
TTTCTAAATTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTGAAAATCTTAAAACTTTATTACATTGTTTCACCATTATATTTATTGTA
CACATAACTATTACTAAAGGTCACTTTACAGGGGGCTGCAAAATGGCCTGAAATTTTAGC
ACCACCCATTTTATACAAGATTTTTTTTTCCCCACAGAATTAATCACAGATTAGGAAAAT
CATTTCAACTAAAAATGTTGGTGAGGTGGTGAAGATATCCTTTTATAAAGTGCAATGTCA
AAAGAGTACTTGAGAAGGCAGGATTCAAGTCCCAGACTTAACATTGCCTAAGGGAAAGAT
AGGGATTTCAAGATACATCTCTAACCTTCTAAATATGGCACTGTAGATGTACCATTACTC
AGCACTCCAGAGAATTACGAATGATATTGGAAGAGACAGTGTTGAATTGGTGGGTAGGTT
GGCCAAGGAGGGTGAAGGGGGACCAGTTCTAATAGTCCTCAACTCCACTCCAGCTGTTCC
TGTTTCATACTGTCCGCCGAGCTGGTCCAGTCCCCTTCACCCAGTGTGTGACCAAAGGCA
GCTTCAAGGCTCAATGGCAAGAGACCACCTATAACCTCTTCACCTTCTGCTGCCTCTTTC
TGCTGCCACTGACTGTCATGACCATCTGCTATAGCCGCATTGTCCTCAGTGTGTCCAGTC
CCCGGACAAGGAAGGGGAATGATGGTGAGACCCCAATCCCCAGGCCCTAACCCATACCCT
AAAGCTATTGCCTCTAACCTCATTAATTGGATTAACTATCTATCAAACCACAAGTGAGAT
ACTTACCATATCTCTAGCACCTGATGCTGCACATTTTATAGAATGCCTTCAATTCTAACC
AGTCACTAGCCATCATTCTCTTGAGTCAGCTGGGCAAGAATTAAGGAGAAAGGTGATCAG
TATTCTCCTTTGCTCCTGGACACCAACAAGTCTTCAAGTAGACTTCAAATAGCTTCATGT
AACACAGCACCTTGATCAAAACTTTTTTAAAAAACTTTTTTCCAGCATGTCTGTCATAAT
CCCTGGTGGGAGGAGACCATATAGTCCATATAGTCCCAGTCTGTAGGGGGAGAGGTCTGC
TTCACTATTTCTACCCTTCCATCAATTCAGAAGCTGAGTGGTTCTGAACTTGGGTGTTAT
TTTCTAAATTCC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               9-383, gnl|bosTau2|chr3 (15431583-15431191)
               

               
               9-383, gnl|Hg17|chr1 (143000484-143000066)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-383, gnl|bosTau2|chr3 (15431583-15431191)
               

               
               9-383, gnl|Hg17|chr1 (143000484-143000066)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               ssp (0.271039)
               

               
               nms (0.213858)
               

               
               pty (0.142714)
               

               
               lnt (0.142308)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.271039)
               

               
               nms (0.213858)
               

               
               pty (0.142714)
               

               
               lnt (0.142308)

	9-383, gnl\|bosTau2\|chr3 (15431583-15431191)
	9-383, gnl\|Hg17\|chr1 (143000484-143000066)