Non-Coding RNA Search

Ss1.1-Pig4-TMW8033P08.5

Sequence:


               
               GACAATTGTTTAAATAAAAGGAACTTCATAATGAAACAAATACTTGAGAAGACTGGCCCA
GGAACCTATGTCAGGATGAGCTGAATTTTAAGTAATTATAATGAGCTGAGTGGATTAGGC
TTGTGACAGAGTAATTTACATGATAGGTGGAACATATTCATTATTTAGTTATTTTGCCTC
TATACATGACATTTAATAAAATATAATTTAATTTTACTTGTGGTTCATCTAGTTAGTAAG
AACTTAGTAATTAGCAGACATTACTGGGACAGATTTACTACTCTTGTAGGAGCCCTTTCC
ATAAGTTGTGATGCTGTAGCCTGATGATGAGGATCCGTAACCTGAGATGATAGTACTTTT
TTCTTCATCTTTGATTTGTGCAGGGCCTCCCCTCTTTTAGATCTAGACATCTTTTCTGAA
TCTTGGCTCCATTTGTATACCTGATTTTCTATGCCCCCAAATAACTAGGGGGTGCCTTGA
GCATTGCACCTGCACTTAAAGGCTGCCTAACACTCTGAGAAAAGCTTGCTGAATATCTTC
CTGCTCCACCCATCCCGAAAGGTAGAAAACAAAATCAGTAATGTTAATTTGTTATTATAA
AATGGATTAGTTATATATAAATACATTTGTAATGGGAGTAAGTTCGTTAGTCTAAAGTAT
ATTTAATCATTATACAATTGACTTAGGAAATACCCAAAGTCAAATTTCTTTAATGACAGT
TTGCAAGCTATCACCATTAAATTCAGATGATTAGGAGTTCCCGTCGTGGCGCAGTGGTTA
ACGAATCCGACTAGGAACCATGAGGTTGCGGGTTCGGTCCCTGCCCTTGCTCGGTGGGTT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------CAACAACAACAACAACAGCAAAAA
GACAAAAGACGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACAATTGTTTAAATAAAAGGAACTTCATAATGAAACAAATACTTGAGAAGACTGGCCCA
GGAACCTATGTCAGGATGAGCTGAATTTTAAGTAATTATAATGAGCTGAGTGGATTAGGC
TTGTGACAGAGTAATTTACATGATAGGTGGAACATATTCATTATTTAGTTATTTTGCCTC
TATACATGACATTTAATAAAATATAATTTAATTTTACTTGTGGTTCATCTAGTTAGTAAG
AACTTAGTAATTAGCAGACATTACTGGGACAGATTTACTACTCTTGTAGGAGCCCTTTCC
ATAAGTTGTGATGCTGTAGCCTGATGATGAGGATCCGTAACCTGAGATGATAGTACTTTT
TTCTTCATCTTTGATTTGTGCAGGGCCTCCCCTCTTTTAGATCTAGACATCTTTTCTGAA
TCTTGGCTCCATTTGTATACCTGATTTTCTATGCCCCCAAATAACTAGGGGGTGCCTTGA
GCATTGCACCTGCACTTAAAGGCTGCCTAACACTCTGAGAAAAGCTTGCTGAATATCTTC
CTGCTCCACCCATCCCGAAAGGTAGAAAACAAAATCAGTAATGTTAATTTGTTATTATAA
AATGGATTAGTTATATATAAATACATTTGTAATGGGAGTAAGTTCGTTAGTCTAAAGTAT
ATTTAATCATTATACAATTGACTTAGGAAATACCCAAAGTCAAATTTCTTTAATGACAGT
TTGCAAGCTATCACCATTAAATTCAGATGATTAGGAGTTCCCGTCGTGGCGCAGTGGTTA
ACGAATCCGACTAGGAACCATGAGGTTGCGGGTTCGGTCCCTGCCCTTGCTCGGTGGGTT
------------------------------------------------------------
------------------------------------------------------------
------------------------------------CAACAACAACAACAACAGCAAAAA
GACAAAAGACGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-600, gnl|bosTau2|chr10 (41027081-41026481)
               

               
               1-600, gnl|Hg17|chr5 (180343635-180344266)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-600, gnl|bosTau2|chr10 (41027081-41026481)
               

               
               1-600, gnl|Hg17|chr5 (180343635-180344266)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               duo (0.172801)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)

	1-600, gnl\|bosTau2\|chr10 (41027081-41026481)
	1-600, gnl\|Hg17\|chr5 (180343635-180344266)