Ss1.1-Pig4-TMW8034D23.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCGCCTCCGTGGCCTGGGGAGGCGTGAATGCTGGGTTCCTGCTGCGGGCGGCCAGGGG TGCATGGTGGAGTCGGCCCGGGGGGCCGCCTCCGTGGCCTGGGGAGGCGTGAATGCTGGG TTCCTGCTGCGGGCGGCCAGGGGTGCATGGTGGAGTCGGCCCGGGGGCATCTTGGGGTCT GGGGAGGCGGCAGCACCAGCGATAGCTAGGAAGTTCCGGGCGACAGGCTCACGCCCGGCG GGGGAGGAAGAAGCCGGCGGCCCGGAGCGGCTTGGGGACGTGGTGAACGTGGTGTTCGTA GACCGATCAGGCCAGCGGATTCCGGTGAGCGGCAGAGTCGGGGATAATGTTCTCCACTTG GCCCAGCGCCATGGGGTGGACCTAGAAGGGGCCTGTGAAGCCTCCTTGGCGTGCTCTACC TGCCATGTGTATGTGAGTGAGGACCACCTGGACCTTCTGCCTCCTCCTGAGGAGAGGGAA GACGACATGCTGGACATGGCCCCCCTCCTCCAAGAGAACTCCCGGCTGGGCTGCCAGATC GTGCTGACGCCAGAGCTGGAAGGGGCTGAATTCACTCTGCCCAAGATCACCAGGAACTTC TACGTGGACGGCCACATCCCCAAGCCGCACTGACACACGGGCAGCTGGACGGTTCCCAGA CACTCATGGCCCCAGGGCCAGGACTGGAGGAATAGTCGAGTTGCCCGCCCAGCCCAGAGC ACGGACAGGCCCGAGAGAGGTGGCGGGAGCACCCAGAAAGCCAAAACCCCTGCTTCAGAG AGATCTGGTGTCCAGGCTCTGGTGGGGACGGGGCCCCTGCTGGGGCAACCTCCCCTAGAC CCCTTTAGGATGGAGGTGTGGATAGGGGTGGAATCTAATTGGAGAGACAATAAAACTGTC TCACAGATCTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCGCCTCCGTGGCCTGGGGAGGCGTGAATGCTGGGTTCCTGCTGCGGGCGGCCAGGGG TGCATGGTGGAGTCGGCCCGGGGGGCCGCCTCCGTGGCCTGGGGAGGCGTGAATGCTGGG TTCCTGCTGCGGGCGGCCAGGGGTGCATGGTGGAGTCGGCCCGGGGGCATCTTGGGGTCT GGGGAGGCGGCAGCACCAGCGATAGCTAGGAAGTTCCGGGCGACAGGCTCACGCCCGGCG GGGGAGGAAGAAGCCGGCGGCCCGGAGCGGCTTGGGGACGTGGTGAACGTGGTGTTCGTA GACCGATCAGGCCAGCGGATTCCGGTGAGCGGCAGAGTCGGGGATAATGTTCTCCACTTG GCCCAGCGCCATGGGGTGGACCTAGAAGGGGCCTGTGAAGCCTCCTTGGCGTGCTCTACC TGCCATGTGTATGTGAGTGAGGACCACCTGGACCTTCTGCCTCCTCCTGAGGAGAGGGAA GACGACATGCTGGACATGGCCCCCCTCCTCCAAGAGAACTCCCGGCTGGGCTGCCAGATC GTGCTGACGCCAGAGCTGGAAGGGGCTGAATTCACTCTGCCCAAGATCACCAGGAACTTC TACGTGGACGGCCACATCCCCAAGCCGCACTGACACACGGGCAGCTGGACGGTTCCCAGA CACTCATGGCCCCAGGGCCAGGACTGGAGGAATAGTCGAGTTGCCCGCCCAGCCCAGAGC ACGGACAGGCCCGAGAGAGGTGGCGGGAGCACCCAGAAAGCCAAAACCCCTGCTTCAGAG AGATCTGGTGTCCAGGCTCTGGTGGGGACGGGGCCCCTGCTGGGGCAACCTCCCCTAGAC CCCTTTAGGATGGAGGTGTGGATAGGGGTGGAATCTAATTGGAGAGACAATAAAACTGTC TCACAGATCTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 84-227, gnl|bosTau2|chr7 (9500687-9500830) | |
| 84-227, gnl|Hg17|chr19 (10287670-10287527) | |
| 84-227, gnl|Mm7|chr9 (20950062-20949946) | |
| 282-389, gnl|bosTau2|chr7 (9501183-9501290) | |
| 282-389, gnl|canFam2|chr20 (53802035-53802143) | |
| 282-389, gnl|canFam2|chr20 (53802146-53802018) | |
| 282-389, gnl|danRer3|chrNA (141084644-141084530) | |
| 282-389, gnl|fr1|chrUn (262351148-262351046) | |
| 282-389, gnl|fr1|chrUn (262351040-262351170) | |
| 282-389, gnl|hg17|chr1 (237143621-237143729) | |
| 282-389, gnl|hg17|chr19 (10287058-10287186) | |
| 282-389, gnl|Hg17|chr19 (10287168-10287061) | |
| 282-389, gnl|mm7|chr5 (101605175-101605067) | |
| 282-389, gnl|mm7|chr9 (20949629-20949756) | |
| 282-389, gnl|Mm7|chr9 (20949739-20949632) | |
| 282-389, gnl|monDom2|scaffold_106 (1998344-1998460) | |
| 282-389, gnl|panTro1|chr1 (221135355-221135463) | |
| 282-389, gnl|panTro1|chr20 (10674347-10674475) | |
| 282-389, gnl|rheMac2|chr1 (216377361-216377252) | |
| 282-389, gnl|rheMac2|chr19 (10127260-10127388) | |
| 282-389, gnl|rn3|chr8 (20095992-20095888) | |
| 282-389, gnl|rn3|chr8 (20095881-20096006) | |
| 282-389, gnl|xenTro1|scaffold_175 (426123-425995) | |
| 454-911, gnl|bosTau2|chr7 (9504623-9505076) | |
| 454-911, gnl|Hg17|chr19 (10282345-10281889) | |
| 454-911, gnl|Mm7|chr9 (20944499-20944073) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 84-227, gnl|bosTau2|chr7 (9500687-9500830) | |
| 84-227, gnl|Hg17|chr19 (10287670-10287527) | |
| 84-227, gnl|Mm7|chr9 (20950062-20949946) | |
| 282-389, gnl|bosTau2|chr7 (9501183-9501290) | |
| 282-389, gnl|canFam2|chr20 (53802035-53802143) | |
| 282-389, gnl|canFam2|chr20 (53802146-53802018) | |
| 282-389, gnl|danRer3|chrNA (141084644-141084530) | |
| 282-389, gnl|fr1|chrUn (262351148-262351046) | |
| 282-389, gnl|fr1|chrUn (262351040-262351170) | |
| 282-389, gnl|hg17|chr1 (237143621-237143729) | |
| 282-389, gnl|hg17|chr19 (10287058-10287186) | |
| 282-389, gnl|Hg17|chr19 (10287168-10287061) | |
| 282-389, gnl|mm7|chr5 (101605175-101605067) | |
| 282-389, gnl|mm7|chr9 (20949629-20949756) | |
| 282-389, gnl|Mm7|chr9 (20949739-20949632) | |
| 282-389, gnl|monDom2|scaffold_106 (1998344-1998460) | |
| 282-389, gnl|panTro1|chr1 (221135355-221135463) | |
| 282-389, gnl|panTro1|chr20 (10674347-10674475) | |
| 282-389, gnl|rheMac2|chr1 (216377361-216377252) | |
| 282-389, gnl|rheMac2|chr19 (10127260-10127388) | |
| 282-389, gnl|rn3|chr8 (20095992-20095888) | |
| 282-389, gnl|rn3|chr8 (20095881-20096006) | |
| 282-389, gnl|xenTro1|scaffold_175 (426123-425995) | |
| 454-911, gnl|bosTau2|chr7 (9504623-9505076) | |
| 454-911, gnl|Hg17|chr19 (10282345-10281889) | |
| 454-911, gnl|Mm7|chr9 (20944499-20944073) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| pla (0.267344) | |
| fcc (0.197785) | |
| csp (0.161186) | |
| pty (0.142714) | |
| ute (0.132784) | |
| cov (0.132153) | |
| jej (0.0989218) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) | |
| fcc (0.197785) | |
| csp (0.161186) | |
| pty (0.142714) | |
| ute (0.132784) | |
| cov (0.132153) | |
| jej (0.0989218) |