Non-Coding RNA Search

Ss1.1-Pig4-TMW8034E18.5

Sequence:


               
               AGTGTGACAAACATTTAAGACTAGGTTCCAAGTCTGTGGAATGACTAAAGCAGTGTTCAG
CAGAAATATGTTTAGAGGTCCGTTTGAAAAGAGGAATGGCTAGGGAAGGAACTGTATCTT
CAGGTGCTTTTAGGCACTAACTTGTGATTAAAGACACAAGTGGCAGAGGCTCTAAGATTA
TTCACACAGGACTAAGCAAAAGAGACTCTAGAACTAGAAAGGTTGAAACACTGAATTTCC
TTTTGAGCCCAAAGGTTGTTGTTCTCACCATTGCCTGCAAACCATCATTGCTTTGGGGAA
ATCAACTGCCTTCATCAGGAAATGTTGAGGCATAACGTGTGATGGACTTGATTGTCCTTT
AGATTGGCAGCTTGTCCTGACCTGGGCTGAACCCAGCATGTGGAAGGGAAAAGCACTCGT
GAAAGAGAGGTCCTGAGATTTCTTCATATCTTGCAGTTAGAAGAAAACAGTTCAGGGTCC
ATGTGTAATGCCATCTCCCAATGTTTTCTATCTCTGTGTGGGTGTTTGTGAGCACATGTG
TACACATCGCCAGTCTGAAAATACTGATAAAAAGGGGAGTGTGCAGGATTCCTGTTATGT
GTTTGTCAAACTTACTGTGGACTGTTTGCTTTCCGATTAATGTGTTGTTTTGGAAAAGAA
AAAATAAAAGTGGCTAATAGGAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGTGACAAACATTTAAGACTAGGTTCCAAGTCTGTGGAATGACTAAAGCAGTGTTCAG
CAGAAATATGTTTAGAGGTCCGTTTGAAAAGAGGAATGGCTAGGGAAGGAACTGTATCTT
CAGGTGCTTTTAGGCACTAACTTGTGATTAAAGACACAAGTGGCAGAGGCTCTAAGATTA
TTCACACAGGACTAAGCAAAAGAGACTCTAGAACTAGAAAGGTTGAAACACTGAATTTCC
TTTTGAGCCCAAAGGTTGTTGTTCTCACCATTGCCTGCAAACCATCATTGCTTTGGGGAA
ATCAACTGCCTTCATCAGGAAATGTTGAGGCATAACGTGTGATGGACTTGATTGTCCTTT
AGATTGGCAGCTTGTCCTGACCTGGGCTGAACCCAGCATGTGGAAGGGAAAAGCACTCGT
GAAAGAGAGGTCCTGAGATTTCTTCATATCTTGCAGTTAGAAGAAAACAGTTCAGGGTCC
ATGTGTAATGCCATCTCCCAATGTTTTCTATCTCTGTGTGGGTGTTTGTGAGCACATGTG
TACACATCGCCAGTCTGAAAATACTGATAAAAAGGGGAGTGTGCAGGATTCCTGTTATGT
GTTTGTCAAACTTACTGTGGACTGTTTGCTTTCCGATTAATGTGTTGTTTTGGAAAAGAA
AAAATAAAAGTGGCTAATAGGAGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               30-684, gnl|bosTau2|chr28 (22431785-22432459)
               

               
               30-684, gnl|Hg17|chr10 (74561705-74562385)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-684, gnl|bosTau2|chr28 (22431785-22432459)
               

               
               30-684, gnl|Hg17|chr10 (74561705-74562385)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lnt (0.142308)
               

               
               ste (0.135208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)
               

               
               ste (0.135208)

	30-684, gnl\|bosTau2\|chr28 (22431785-22432459)
	30-684, gnl\|Hg17\|chr10 (74561705-74562385)