Ss1.1-Pig4-TMW8034I01.5
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CATGGAGACTGTGGCACAGTAGCGTCTGAGTAGTGAGGATTGCGAGGCCGACGGCCATGG
AGGCCGTGCTGAACGAGTTGGTGTCTGTGGAGGATCTGCTGAAATTTGAAAGGAAATTTC
AGTCTGAGAAGGCAGCAGGCTCGGTGTCCAAGAGCACGCAGTTTGAATATGCCTGGTGTC
TGGTGCGAAGCAAGTACAACGATGACATCCGTAAAGGCCTTGCTCTGCTGGAGGAGCTGC
TGCCCAAAGGGAGCAAAGAGGAGCAGCGGGATTATGTCTTCTACCTGGCCGTGGGGAACT
ACCGGCTCAAGGAATATGAAAAGGCCCTAAAGTATGTGCGCGGGCTGCTGCAGACAGAGC
CACAGAACAACCAGGCCAAGGAACTGGAAGGGCTCATTGACAAGGCCATGAAGAAAGATG
GACTAGTGGGCATGGCCATTGTTGGAGGCATGGCCCTGGGCGTGGCCGGACTGGCTGGAC
TCATTGGACTTGCTGTATCCAAGTCCAAATCCTGAACGAGACTGCATCTCCGCCTCTGCC
CGGGGATACATGGGAGCCCGTGGAGGACACTGGAGAGACCCCTCCTGACCCCCGTCCCTC
TTCCCCTGCACCCCGGCACTGTCCTCTGTGGCCTTCAGTCCCTCCCCCCGAGACCTGTCC
TCTAGCCCCAAATCATGTGCTGTGGGACAAGTGTAAATAAACTGGGCTTTGGCTTGGGAA
AAAAAAAAAAAAAAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CATGGAGACTGTGGCACAGTAGCGTCTGAGTAGTGAGGATTGCGAGGCCGACGGCCATGG
AGGCCGTGCTGAACGAGTTGGTGTCTGTGGAGGATCTGCTGAAATTTGAAAGGAAATTTC
AGTCTGAGAAGGCAGCAGGCTCGGTGTCCAAGAGCACGCAGTTTGAATATGCCTGGTGTC
TGGTGCGAAGCAAGTACAACGATGACATCCGTAAAGGCCTTGCTCTGCTGGAGGAGCTGC
TGCCCAAAGGGAGCAAAGAGGAGCAGCGGGATTATGTCTTCTACCTGGCCGTGGGGAACT
ACCGGCTCAAGGAATATGAAAAGGCCCTAAAGTATGTGCGCGGGCTGCTGCAGACAGAGC
CACAGAACAACCAGGCCAAGGAACTGGAAGGGCTCATTGACAAGGCCATGAAGAAAGATG
GACTAGTGGGCATGGCCATTGTTGGAGGCATGGCCCTGGGCGTGGCCGGACTGGCTGGAC
TCATTGGACTTGCTGTATCCAAGTCCAAATCCTGAACGAGACTGCATCTCCGCCTCTGCC
CGGGGATACATGGGAGCCCGTGGAGGACACTGGAGAGACCCCTCCTGACCCCCGTCCCTC
TTCCCCTGCACCCCGGCACTGTCCTCTGTGGCCTTCAGTCCCTCCCCCCGAGACCTGTCC
TCTAGCCCCAAATCATGTGCTGTGGGACAAGTGTAAATAAACTGGGCTTTGGCTTGGGAA
AAAAAAAAAAAAAAAAAAAAAAAA
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98-234, gnl|bosTau2|chr25 (30507506-30507370) |
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98-234, gnl|canFam2|chr6 (11647677-11647537) |
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98-234, gnl|danRer3|chr7 (13550985-13550848) |
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98-234, gnl|dasNov1|scaffold_26431 (8450-8311) |
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98-234, gnl|echTel1|scaffold_222836 (1138-994) |
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98-234, gnl|fr1|chrUn (277681719-277681859) |
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98-234, gnl|hg17|chr7 (100480719-100480859) |
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98-234, gnl|Hg17|chr7 (100480859-100480723) |
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98-234, gnl|loxAfr1|scaffold_100576 (392-252) |
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98-234, gnl|mm7|chr5 (135934047-135933907) |
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98-234, gnl|Mm7|chr5 (135933905-135934041) |
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98-234, gnl|monDom2|scaffold_66 (3217392-3217532) |
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98-234, gnl|oryCun1|scaffold_215031 (37484-37344) |
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98-234, gnl|panTro1|chr6 (102249440-102249580) |
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98-234, gnl|rheMac2|chr3 (48534668-48534808) |
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98-234, gnl|rn3|chr12 (20808324-20808184) |
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98-234, gnl|tetNig1|chr20 (693148-693288) |
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416-720, gnl|bosTau2|chr25 (30505134-30504826) |
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416-720, gnl|Hg17|chr7 (100476621-100476328) |
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416-720, gnl|Mm7|chr5 (135936825-135937144) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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98-234, gnl|bosTau2|chr25 (30507506-30507370) |
|
98-234, gnl|canFam2|chr6 (11647677-11647537) |
|
98-234, gnl|danRer3|chr7 (13550985-13550848) |
|
98-234, gnl|dasNov1|scaffold_26431 (8450-8311) |
|
98-234, gnl|echTel1|scaffold_222836 (1138-994) |
|
98-234, gnl|fr1|chrUn (277681719-277681859) |
|
98-234, gnl|hg17|chr7 (100480719-100480859) |
|
98-234, gnl|Hg17|chr7 (100480859-100480723) |
|
98-234, gnl|loxAfr1|scaffold_100576 (392-252) |
|
98-234, gnl|mm7|chr5 (135934047-135933907) |
|
98-234, gnl|Mm7|chr5 (135933905-135934041) |
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98-234, gnl|monDom2|scaffold_66 (3217392-3217532) |
|
98-234, gnl|oryCun1|scaffold_215031 (37484-37344) |
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98-234, gnl|panTro1|chr6 (102249440-102249580) |
|
98-234, gnl|rheMac2|chr3 (48534668-48534808) |
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98-234, gnl|rn3|chr12 (20808324-20808184) |
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98-234, gnl|tetNig1|chr20 (693148-693288) |
| |
|
416-720, gnl|bosTau2|chr25 (30505134-30504826) |
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416-720, gnl|Hg17|chr7 (100476621-100476328) |
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416-720, gnl|Mm7|chr5 (135936825-135937144) |
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cov (0.792917) |
|
hyp (0.714184) |
|
fbs (0.701385) |
|
col (0.585023) |
|
cga (0.558191) |
|
nms (0.427716) |
|
che (0.408942) |
|
jej (0.395687) |
|
nco (0.323468) |
|
csp (0.322373) |
|
cli (0.305623) |
|
eje (0.296501) |
|
lnt (0.284616) |
|
eep (0.245128) |
|
med (0.232504) |
|
ece (0.229305) |
|
mas (0.210305) |
|
fty (0.17584) |
|
sin (0.174948) |
|
duo (0.172801) |
|
mcp (0.170648) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
cki (0.165235) |
|
eli (0.151814) |
|
cag (0.151194) |
|
pty (0.142714) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
nmm (0.132802) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
ldo (0.0970026) |
|
cov (0.792917) |
|
hyp (0.714184) |
|
fbs (0.701385) |
|
col (0.585023) |
|
cga (0.558191) |
|
nms (0.427716) |
|
che (0.408942) |
|
jej (0.395687) |
|
nco (0.323468) |
|
csp (0.322373) |
|
cli (0.305623) |
|
eje (0.296501) |
|
lnt (0.284616) |
|
eep (0.245128) |
|
med (0.232504) |
|
ece (0.229305) |
|
mas (0.210305) |
|
fty (0.17584) |
|
sin (0.174948) |
|
duo (0.172801) |
|
mcp (0.170648) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
cki (0.165235) |
|
eli (0.151814) |
|
cag (0.151194) |
|
pty (0.142714) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
nmm (0.132802) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
ldo (0.0970026) |
