Ss1.1-Pig4-TMW8034K01.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTTCACGGGGGCTGCCGCACCCCAGAGCCCTCTGATGTCGCCCCGAATGGCGCACACG CAGAGCCCCATGCTGCAGCAGTCTCAGCCCAACCCTGCCTACCAGGCCTCCTCGGACATG AACGGCTGGGCGCAGGGGAGCATGGGTGGAAACAGCATGTTTTCACAACAGTCCCCACCA CACTTTGGACCACAAGCGAACACCAGCATGTACAATAACAATATGAACATCAGTGTATCC ATGGCGACCAGCACAGGTGGGATGAGCAACATGAACCAGATGACAGGACAGATCAGCATG ACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTCCATGGGTCCCGAGCAGGTTAAT GATCCTGCTCTGAGGGGAGGCAGCCTGTTCCCAAACCAGCTGCCTGGAATGGATATGATT AAGCAGGAGGGAGATGCATCACGGAAATACTGCTGACACTGAAGGTAGCTGGTTGCTTCT TTCTTCAGCTGATTGGGCTCTCTTGCTCAAAACGCTTACCAGTCTGGAGAGCTGCGTCTA TTTGTTTTGACCCAACCGACCTGCCATCCAGTCCTGCCTGAGCAAGATGGGCAGATAGGC CTGGGCCCTGCCCCCCGGTGGAGCCCCCTCAGCTGCCGCAGGAGGAGCTGTCTCCCTGTT GACAGTCTGCAGCTCGAGCTGGACAGTTGCTCAGTCTGTTCACTGCATTCACCTTAGTGC AACTTAGATCTCTCCTGCAAAGTCAATGTTGACAGGCAAACTTCATACCGTGTCAGATTG AATGTATCTAAATGTATGTATTTAAGGGAAACACCCTTGCTCTTGTTCTGTTCCTATCTG GTTCCAGACACTGGTTTCTTGCTTCGTTTTCCCTAGCTAACCTTAAATGATTAAGAGTTC ATCTGAGGGAAAGAAAAGAATTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTTCACGGGGGCTGCCGCACCCCAGAGCCCTCTGATGTCGCCCCGAATGGCGCACACG CAGAGCCCCATGCTGCAGCAGTCTCAGCCCAACCCTGCCTACCAGGCCTCCTCGGACATG AACGGCTGGGCGCAGGGGAGCATGGGTGGAAACAGCATGTTTTCACAACAGTCCCCACCA CACTTTGGACCACAAGCGAACACCAGCATGTACAATAACAATATGAACATCAGTGTATCC ATGGCGACCAGCACAGGTGGGATGAGCAACATGAACCAGATGACAGGACAGATCAGCATG ACCTCAGTGACCTCCGTGCCTACGTCAGGGCTGTCCTCCATGGGTCCCGAGCAGGTTAAT GATCCTGCTCTGAGGGGAGGCAGCCTGTTCCCAAACCAGCTGCCTGGAATGGATATGATT AAGCAGGAGGGAGATGCATCACGGAAATACTGCTGACACTGAAGGTAGCTGGTTGCTTCT TTCTTCAGCTGATTGGGCTCTCTTGCTCAAAACGCTTACCAGTCTGGAGAGCTGCGTCTA TTTGTTTTGACCCAACCGACCTGCCATCCAGTCCTGCCTGAGCAAGATGGGCAGATAGGC CTGGGCCCTGCCCCCCGGTGGAGCCCCCTCAGCTGCCGCAGGAGGAGCTGTCTCCCTGTT GACAGTCTGCAGCTCGAGCTGGACAGTTGCTCAGTCTGTTCACTGCATTCACCTTAGTGC AACTTAGATCTCTCCTGCAAAGTCAATGTTGACAGGCAAACTTCATACCGTGTCAGATTG AATGTATCTAAATGTATGTATTTAAGGGAAACACCCTTGCTCTTGTTCTGTTCCTATCTG GTTCCAGACACTGGTTTCTTGCTTCGTTTTCCCTAGCTAACCTTAAATGATTAAGAGTTC ATCTGAGGGAAAGAAAAGAATTTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 154-356, gnl|bosTau2|chr14 (19753478-19753680) | |
| 154-356, gnl|canFam2|chr29 (22262209-22262430) | |
| 154-356, gnl|danRer3|chr24 (14773805-14774007) | |
| 154-356, gnl|dasNov1|scaffold_11661 (1860-2088) | |
| 154-356, gnl|echTel1|scaffold_297569 (137821-137590) | |
| 154-356, gnl|fr1|chrUn (285167483-285167245) | |
| 154-356, gnl|galGal2|chr2 (115890611-115890836) | |
| 154-356, gnl|hg17|chr8 (71198659-71198882) | |
| 154-356, gnl|Hg17|chr8 (71198873-71198671) | |
| 154-356, gnl|mm7|chr1 (13294615-13294834) | |
| 154-356, gnl|Mm7|chr1 (13294828-13294626) | |
| 154-356, gnl|monDom2|scaffold_4 (90800441-90800207) | |
| 154-356, gnl|oryCun1|scaffold_193112 (23945-24171) | |
| 154-356, gnl|panTro1|chr7 (73180939-73181162) | |
| 154-356, gnl|rheMac2|chr8 (72720612-72720835) | |
| 154-356, gnl|rn3|chr5 (5271455-5271237) | |
| 154-356, gnl|xenTro1|scaffold_245 (115956-116175) | |
| 444-919, gnl|bosTau2|chr14 (19758699-19759166) | |
| 444-919, gnl|Hg17|chr8 (71188433-71187964) | |
| 444-919, gnl|Mm7|chr1 (13289084-13288620) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 154-356, gnl|bosTau2|chr14 (19753478-19753680) | |
| 154-356, gnl|canFam2|chr29 (22262209-22262430) | |
| 154-356, gnl|danRer3|chr24 (14773805-14774007) | |
| 154-356, gnl|dasNov1|scaffold_11661 (1860-2088) | |
| 154-356, gnl|echTel1|scaffold_297569 (137821-137590) | |
| 154-356, gnl|fr1|chrUn (285167483-285167245) | |
| 154-356, gnl|galGal2|chr2 (115890611-115890836) | |
| 154-356, gnl|hg17|chr8 (71198659-71198882) | |
| 154-356, gnl|Hg17|chr8 (71198873-71198671) | |
| 154-356, gnl|mm7|chr1 (13294615-13294834) | |
| 154-356, gnl|Mm7|chr1 (13294828-13294626) | |
| 154-356, gnl|monDom2|scaffold_4 (90800441-90800207) | |
| 154-356, gnl|oryCun1|scaffold_193112 (23945-24171) | |
| 154-356, gnl|panTro1|chr7 (73180939-73181162) | |
| 154-356, gnl|rheMac2|chr8 (72720612-72720835) | |
| 154-356, gnl|rn3|chr5 (5271455-5271237) | |
| 154-356, gnl|xenTro1|scaffold_245 (115956-116175) | |
| 444-919, gnl|bosTau2|chr14 (19758699-19759166) | |
| 444-919, gnl|Hg17|chr8 (71188433-71187964) | |
| 444-919, gnl|Mm7|chr1 (13289084-13288620) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.170503) | |
| cut (0.169924) | |
| ese (0.126502) |