Non-Coding RNA Search

Ss1.1-Pig4-TMW8034O06.5

Sequence:


               
               CATTTGTCATATTTAAGGAGTTCCTAAGATTAGTACTTTGTTACAGCAGATTATTATATT
TGGTGTTCATAGTGTTGACCCTGGAATCTTCCTCAGAAAGCTGGGGGTAGAATTTTACTA
AGCAGTAAGTCAAAGCATTTTAGGACCAACTCCATCAAAAGATGGTTTAAATTTTTTTTA
AGCTATTTCTTTAAGATGTGAATGAAAAGTTCATTTATATGAATTATGTTTATTCCTAAA
AATAAGATAACATGAGATGTGTGTATTCTAAAGTATTTACAAATAATAACATTTAATGTT
AGGAACTGCCCTGTTTAGGGTATATAAATAAATGCCTTTATAATGTTTCAAGCTCAGCCA
ATATCTCTATGTGTTAATGGGCAAAGCAGTTGAAACAGGCTGTCAGTTTGAAAATATGAT
ATGTAAATGTGTACAAGATACAGTACTACTACAGCTAATAATGATAAGCTGACTATAATG
TCTTCTTGAGTTTATATTTAACAATATTTTACAAGTCAAGTTGATTTTAAATCATGATTT
CCGACTTAATTATTAGTTCATTAGTATTTGTCTCTTCTAGTTTGTGTGTGTGGATGTGTA
CATGTTTTAACTGTTAACAGTTGTAGTAATTTTGATGAATATTAATCCTCGAAAAAAGAA
TTGAGACATATTTACTTCTGTTTTAAATTGATTACAAAAGGGAGTTCCCATTGTGGTTCA
GCAATAACGAACCCAACTAATATCCATGAGGACATGGATTCAATTCCTGGCCTTTCTCTG
TGGGTTAAGGATCAGGCATGGCCACAAGTTGCAGCATAGGTCACAGACACAGCTCAGATC
TGGCGTTGCAGTGGCTGTGGCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTGTCATATTTAAGGAGTTCCTAAGATTAGTACTTTGTTACAGCAGATTATTATATT
TGGTGTTCATAGTGTTGACCCTGGAATCTTCCTCAGAAAGCTGGGGGTAGAATTTTACTA
AGCAGTAAGTCAAAGCATTTTAGGACCAACTCCATCAAAAGATGGTTTAAATTTTTTTTA
AGCTATTTCTTTAAGATGTGAATGAAAAGTTCATTTATATGAATTATGTTTATTCCTAAA
AATAAGATAACATGAGATGTGTGTATTCTAAAGTATTTACAAATAATAACATTTAATGTT
AGGAACTGCCCTGTTTAGGGTATATAAATAAATGCCTTTATAATGTTTCAAGCTCAGCCA
ATATCTCTATGTGTTAATGGGCAAAGCAGTTGAAACAGGCTGTCAGTTTGAAAATATGAT
ATGTAAATGTGTACAAGATACAGTACTACTACAGCTAATAATGATAAGCTGACTATAATG
TCTTCTTGAGTTTATATTTAACAATATTTTACAAGTCAAGTTGATTTTAAATCATGATTT
CCGACTTAATTATTAGTTCATTAGTATTTGTCTCTTCTAGTTTGTGTGTGTGGATGTGTA
CATGTTTTAACTGTTAACAGTTGTAGTAATTTTGATGAATATTAATCCTCGAAAAAAGAA
TTGAGACATATTTACTTCTGTTTTAAATTGATTACAAAAGGGAGTTCCCATTGTGGTTCA
GCAATAACGAACCCAACTAATATCCATGAGGACATGGATTCAATTCCTGGCCTTTCTCTG
TGGGTTAAGGATCAGGCATGGCCACAAGTTGCAGCATAGGTCACAGACACAGCTCAGATC
TGGCGTTGCAGTGGCTGTGGCTGT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               16-699, gnl|bosTau2|chr11 (75416297-75415568)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-699, gnl|bosTau2|chr11 (75416297-75415568)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               cbe (0.239234)
               

               
               spl (0.143184)
               

               
               nca (0.136874)
               

               
               cty (0.10408)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               spl (0.143184)
               

               
               nca (0.136874)
               

               
               cty (0.10408)