Ss1.1-Pig4-TMW8035B24.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTTGATGAGCTTCCCAGGACAGCATTCCTCATCTTCAAAGGAATTAACATCCTTGTGAA GTCCAAGGCCTTCCAGTATTTCATGTACTTGGTGGTGGCAGTCAATGGGGTTTGGATCCT CGTGGAGACCTTCATGATGAAAGGTGGGAACTTCTTCTCCAAGCATGTGCCCTGGAGTTA CCTCGTCTTTCTGACTATCTACGGGGTGGAGCTGTTCCTGAAGGTTGCCGGCCTGGGCCC CGTTGAGTACCTGTCCTCCGGGTGGAATCTGTTCGACTTCTCTGTCACAGCATTCGCCTT CCTGGGGCTTCTGGCTCTGGCCTTCAACATGGAGCCCTTCTACTTCATAGTGGTCCTGCG TCCCCTCCAGCTGCTGAGGTTGTTTAAATTGAAGAAGCGTTACCGCAACGTGCTGGACAC CATGTTTGAGCTGCTGCCCCGCATGGCCAGCCTGGGCCTCACCCTGCTCACCTTTTACTA CTCCTTCGCCATCGTGGGCATGGAATTCTTCTGCGGAATCCTCTACCCCAACTGCTGCAA CACGAGCACCGTGGCAGATGCCTACCGCTGGCTCAATCGCACCATGGGCAACAGGACCGT CGTAGAGGAAGGTTACTACTATCTTAATAACTTTGACAACATCCTGAACAGCTTCGTGAC CTTGTTTGAGCTGACAGTTGTCAACAACTGGTACATCATCATGGAAGGCGTCACCTCTCA GACCTCGCACTGGAGCCGCCTCTACTTCATGACCTTCTACATCGTGACCATGGTGGTGAT GACGATCATCGTCGCCTTCATCCTCGAAGCCTTCGTCTTCCGAATGAACTACAGCCGCAA GAACCAGGACTCAGAAGTTGACGGCGGCATCACCCTGGAGAAGGAACTCTCCAAAGATGA GCTGGTTGCTGTCCTGAAGCTCTACCGAGAAGCACGGGGAGCCACCTCGGACATCACGCA GCTACTCAAGATCCTTTCCCAGATGGAGAGATACGAGCAAAATGCCCTGGTGTTTCTGGG ACGGAGGTCAAGGACCAAAAGCGATCTGAGCCTAAAGATGTACCAAGAGGAGATTCAGGA GTGGTACGAGGAACATGCCCAGAAGCAGGAAGAACAGCAGCGACAGCTCAGCGGCTGTGT GGTCCCCACCACCCAGCAGCCTCCAGGCAGCCGCCAGCGCTCCCAGACCATCACCTAACT CTAGCCTGCAAAAGCCATCTCTTCTATGCAATAACAATAGTATTATTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTTGATGAGCTTCCCAGGACAGCATTCCTCATCTTCAAAGGAATTAACATCCTTGTGAA GTCCAAGGCCTTCCAGTATTTCATGTACTTGGTGGTGGCAGTCAATGGGGTTTGGATCCT CGTGGAGACCTTCATGATGAAAGGTGGGAACTTCTTCTCCAAGCATGTGCCCTGGAGTTA CCTCGTCTTTCTGACTATCTACGGGGTGGAGCTGTTCCTGAAGGTTGCCGGCCTGGGCCC CGTTGAGTACCTGTCCTCCGGGTGGAATCTGTTCGACTTCTCTGTCACAGCATTCGCCTT CCTGGGGCTTCTGGCTCTGGCCTTCAACATGGAGCCCTTCTACTTCATAGTGGTCCTGCG TCCCCTCCAGCTGCTGAGGTTGTTTAAATTGAAGAAGCGTTACCGCAACGTGCTGGACAC CATGTTTGAGCTGCTGCCCCGCATGGCCAGCCTGGGCCTCACCCTGCTCACCTTTTACTA CTCCTTCGCCATCGTGGGCATGGAATTCTTCTGCGGAATCCTCTACCCCAACTGCTGCAA CACGAGCACCGTGGCAGATGCCTACCGCTGGCTCAATCGCACCATGGGCAACAGGACCGT CGTAGAGGAAGGTTACTACTATCTTAATAACTTTGACAACATCCTGAACAGCTTCGTGAC CTTGTTTGAGCTGACAGTTGTCAACAACTGGTACATCATCATGGAAGGCGTCACCTCTCA GACCTCGCACTGGAGCCGCCTCTACTTCATGACCTTCTACATCGTGACCATGGTGGTGAT GACGATCATCGTCGCCTTCATCCTCGAAGCCTTCGTCTTCCGAATGAACTACAGCCGCAA GAACCAGGACTCAGAAGTTGACGGCGGCATCACCCTGGAGAAGGAACTCTCCAAAGATGA GCTGGTTGCTGTCCTGAAGCTCTACCGAGAAGCACGGGGAGCCACCTCGGACATCACGCA GCTACTCAAGATCCTTTCCCAGATGGAGAGATACGAGCAAAATGCCCTGGTGTTTCTGGG ACGGAGGTCAAGGACCAAAAGCGATCTGAGCCTAAAGATGTACCAAGAGGAGATTCAGGA GTGGTACGAGGAACATGCCCAGAAGCAGGAAGAACAGCAGCGACAGCTCAGCGGCTGTGT GGTCCCCACCACCCAGCAGCCTCCAGGCAGCCGCCAGCGCTCCCAGACCATCACCTAACT CTAGCCTGCAAAAGCCATCTCTTCTATGCAATAACAATAGTATTATTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 271-380, gnl|bosTau2|chr17 (37752199-37752090) | |
| 271-380, gnl|Hg17|chr12 (112187512-112187621) | |
| 271-380, gnl|Mm7|chr5 (119777438-119777329) | |
| 542-654, gnl|bosTau2|chr17 (37749875-37749763) | |
| 542-654, gnl|canFam2|chr26 (13676575-13676718) | |
| 542-654, gnl|danRer3|chr5 (16122503-16122367) | |
| 542-654, gnl|dasNov1|scaffold_30064 (3094-2951) | |
| 542-654, gnl|echTel1|scaffold_318798 (2508-2363) | |
| 542-654, gnl|fr1|chrUn (1549458-1549580) | |
| 542-654, gnl|galGal2|chr15 (12381454-12381332) | |
| 542-654, gnl|hg17|chr12 (112190652-112190796) | |
| 542-654, gnl|Hg17|chr12 (112190654-112190766) | |
| 542-654, gnl|loxAfr1|scaffold_23454 (5386-5529) | |
| 542-654, gnl|mm7|chr5 (119774675-119774541) | |
| 542-654, gnl|Mm7|chr5 (119774674-119774562) | |
| 542-654, gnl|monDom2|scaffold_110 (1617615-1617751) | |
| 542-654, gnl|oryCun1|scaffold_181782 (5697-5568) | |
| 542-654, gnl|panTro1|chr10 (114898535-114898679) | |
| 542-654, gnl|rheMac2|chr11 (114213331-114213475) | |
| 542-654, gnl|rn3|chr12 (37084596-37084719) | |
| 542-654, gnl|tetNig1|chr12 (6107312-6107434) | |
| 856-997, gnl|bosTau2|chr17 (37747367-37747226) | |
| 856-997, gnl|Hg17|chr12 (112193457-112193598) | |
| 856-997, gnl|Mm7|chr5 (119771939-119771798) | |
| 1077-1248, gnl|bosTau2|chr17 (37745766-37745599) | |
| 1077-1248, gnl|canFam2|chr26 (13681324-13681682) | |
| 1077-1248, gnl|dasNov1|scaffold_66054 (3687-4047) | |
| 1077-1248, gnl|galGal2|chr15 (12375494-12375211) | |
| 1077-1248, gnl|hg17|chr12 (112196401-112196693) | |
| 1077-1248, gnl|Hg17|chr12 (112196483-112196652) | |
| 1077-1248, gnl|loxAfr1|scaffold_23454 (9800-10206) | |
| 1077-1248, gnl|mm7|chr5 (119770327-119770002) | |
| 1077-1248, gnl|Mm7|chr5 (119770212-119770043) | |
| 1077-1248, gnl|monDom2|scaffold_110 (1621372-1621668) | |
| 1077-1248, gnl|oryCun1|scaffold_181782 (1361-1055) | |
| 1077-1248, gnl|panTro1|chr10 (114904303-114904595) | |
| 1077-1248, gnl|rheMac2|chr11 (114219026-114219318) | |
| 1077-1248, gnl|rn3|chr12 (37088853-37089165) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 271-380, gnl|bosTau2|chr17 (37752199-37752090) | |
| 271-380, gnl|Hg17|chr12 (112187512-112187621) | |
| 271-380, gnl|Mm7|chr5 (119777438-119777329) | |
| 542-654, gnl|bosTau2|chr17 (37749875-37749763) | |
| 542-654, gnl|canFam2|chr26 (13676575-13676718) | |
| 542-654, gnl|danRer3|chr5 (16122503-16122367) | |
| 542-654, gnl|dasNov1|scaffold_30064 (3094-2951) | |
| 542-654, gnl|echTel1|scaffold_318798 (2508-2363) | |
| 542-654, gnl|fr1|chrUn (1549458-1549580) | |
| 542-654, gnl|galGal2|chr15 (12381454-12381332) | |
| 542-654, gnl|hg17|chr12 (112190652-112190796) | |
| 542-654, gnl|Hg17|chr12 (112190654-112190766) | |
| 542-654, gnl|loxAfr1|scaffold_23454 (5386-5529) | |
| 542-654, gnl|mm7|chr5 (119774675-119774541) | |
| 542-654, gnl|Mm7|chr5 (119774674-119774562) | |
| 542-654, gnl|monDom2|scaffold_110 (1617615-1617751) | |
| 542-654, gnl|oryCun1|scaffold_181782 (5697-5568) | |
| 542-654, gnl|panTro1|chr10 (114898535-114898679) | |
| 542-654, gnl|rheMac2|chr11 (114213331-114213475) | |
| 542-654, gnl|rn3|chr12 (37084596-37084719) | |
| 542-654, gnl|tetNig1|chr12 (6107312-6107434) | |
| 856-997, gnl|bosTau2|chr17 (37747367-37747226) | |
| 856-997, gnl|Hg17|chr12 (112193457-112193598) | |
| 856-997, gnl|Mm7|chr5 (119771939-119771798) | |
| 1077-1248, gnl|bosTau2|chr17 (37745766-37745599) | |
| 1077-1248, gnl|canFam2|chr26 (13681324-13681682) | |
| 1077-1248, gnl|dasNov1|scaffold_66054 (3687-4047) | |
| 1077-1248, gnl|galGal2|chr15 (12375494-12375211) | |
| 1077-1248, gnl|hg17|chr12 (112196401-112196693) | |
| 1077-1248, gnl|Hg17|chr12 (112196483-112196652) | |
| 1077-1248, gnl|loxAfr1|scaffold_23454 (9800-10206) | |
| 1077-1248, gnl|mm7|chr5 (119770327-119770002) | |
| 1077-1248, gnl|Mm7|chr5 (119770212-119770043) | |
| 1077-1248, gnl|monDom2|scaffold_110 (1621372-1621668) | |
| 1077-1248, gnl|oryCun1|scaffold_181782 (1361-1055) | |
| 1077-1248, gnl|panTro1|chr10 (114904303-114904595) | |
| 1077-1248, gnl|rheMac2|chr11 (114219026-114219318) | |
| 1077-1248, gnl|rn3|chr12 (37088853-37089165) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cut (0.169924) |