Non-Coding RNA Search

Ss1.1-Pig4-TMW8035E05.5

Sequence:


               
               CCCATTGAGCCACCAGGGAACTCCCTCCAGTCCTTATTCTGAATGACAGTGTTACTTGTT
CCTCACTGGTGGACTGGGAGAATTCTTTTCCTCTTGGGACTGCTGTGTAGGGAGCAGAAA
TTTCTCATCCTGGTCACGTGAAGACACACAATGTAATTGACAGAAATTGAATTCCTTTTT
TGTCTTGTTTGGAACAGTTGAGAAATTACCAAAATAAGACCTGGTATAATGGAATTAACA
TGTAAAATAAGTGAAATACTGAAGATTGAAATTAGATACTTAAATGGCCCCATGTTTAAA
TTGAGCTACGTTAAAATTATTTTTTCCACCATTTGACATTTTCTAATCTCAACCTGTATA
CATCTTATTCATTACTGGAAATGTTTTACTCCAGTCTTCACTCAAAAGAGTAGCCCAAAG
TTATCATGCACTTTTAAAAAATGTTTTTTAAAAGCCATTAAAAGGAGTTCCCCGTGTAGC
ATAATGTGATCCGTGGCATCGTTGCATCACCAGGACGCAGGTTCAATCCCTGGCCTGGCA
CAGTGAGTTAAAGGATCCAGTGTTGCCACAGTTGTGATGTAGGTCACAACTGTACCTTGG
ATCTGATCCCTGGCCTAGTAATGCCATAGGCTTCGGGGCAGCCAAAAAAGAAAAAAAAAA
AAAACCCGTATTAAAGGGGGGCTGATTCCTGATAAAAACTACAGCAGGGGCCTTTTTTAT
TAAAGTTCTAAATGGCTTTTTTCAGGCTCCTGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCATTGAGCCACCAGGGAACTCCCTCCAGTCCTTATTCTGAATGACAGTGTTACTTGTT
CCTCACTGGTGGACTGGGAGAATTCTTTTCCTCTTGGGACTGCTGTGTAGGGAGCAGAAA
TTTCTCATCCTGGTCACGTGAAGACACACAATGTAATTGACAGAAATTGAATTCCTTTTT
TGTCTTGTTTGGAACAGTTGAGAAATTACCAAAATAAGACCTGGTATAATGGAATTAACA
TGTAAAATAAGTGAAATACTGAAGATTGAAATTAGATACTTAAATGGCCCCATGTTTAAA
TTGAGCTACGTTAAAATTATTTTTTCCACCATTTGACATTTTCTAATCTCAACCTGTATA
CATCTTATTCATTACTGGAAATGTTTTACTCCAGTCTTCACTCAAAAGAGTAGCCCAAAG
TTATCATGCACTTTTAAAAAATGTTTTTTAAAAGCCATTAAAAGGAGTTCCCCGTGTAGC
ATAATGTGATCCGTGGCATCGTTGCATCACCAGGACGCAGGTTCAATCCCTGGCCTGGCA
CAGTGAGTTAAAGGATCCAGTGTTGCCACAGTTGTGATGTAGGTCACAACTGTACCTTGG
ATCTGATCCCTGGCCTAGTAATGCCATAGGCTTCGGGGCAGCCAAAAAAGAAAAAAAAAA
AAAACCCGTATTAAAGGGGGGCTGATTCCTGATAAAAACTACAGCAGGGGCCTTTTTTAT
TAAAGTTCTAAATGGCTTTTTTCAGGCTCCTGTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               28-458, gnl|bosTau2|chr29 (18529029-18529457)
               

               
               28-458, gnl|Hg17|chr11 (18257718-18257023)
               

               
               28-458, gnl|Mm7|chr7 (42937370-42936806)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-458, gnl|bosTau2|chr29 (18529029-18529457)
               

               
               28-458, gnl|Hg17|chr11 (18257718-18257023)
               

               
               28-458, gnl|Mm7|chr7 (42937370-42936806)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               kid (0.129735)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)
               

               
               cbl (0.114797)

	28-458, gnl\|bosTau2\|chr29 (18529029-18529457)
	28-458, gnl\|Hg17\|chr11 (18257718-18257023)
	28-458, gnl\|Mm7\|chr7 (42937370-42936806)