Ss1.1-Pig4-TMW8035F11.3
|
CCCTGGAGCAGGGTGTGTGGCGAGGCACCAGCCCCCCACCCCATCACGTCCCCCGACCCC
CACCACTGCTGCCGCGTGCCAGATCCTGGCCCTGCGTTGTTGTCGGTGTAGAGACTGTAC
AGGCGCAAGGATGCGTGATCAAGCACTACATGTCAAGTCCAGTTTAGATGTTCGTCCCTC
TTCTCCCCTGAAGCCTGAAGAATGGAGCTCCAGCCTCAAACACTGAGGCATGTGCTTGAC
ATTCTAGAAACTCAGGGGTGGGGAGGGGTGAACTGTTTGTTAGGCAACACACTGGATCTG
AGGCCTTTACTGAGCTGAACATCCTGACGCTCTACTGTCGTCTCATTGGATTCTTCTTTT
TTGATAGCGGGAGGAAGTATGACTAATGCTAGAGCCTGAAACTATGGAAATGCTGCTAAA
ATTTTTATATTGACAAACATTTTCTCGGTACTTCATTGTGATTTTTCATTAATCAACCAC
ATTAAATTTATAATAAAAAAATGCCCCTCAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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CCCTGGAGCAGGGTGTGTGGCGAGGCACCAGCCCCCCACCCCATCACGTCCCCCGACCCC
CACCACTGCTGCCGCGTGCCAGATCCTGGCCCTGCGTTGTTGTCGGTGTAGAGACTGTAC
AGGCGCAAGGATGCGTGATCAAGCACTACATGTCAAGTCCAGTTTAGATGTTCGTCCCTC
TTCTCCCCTGAAGCCTGAAGAATGGAGCTCCAGCCTCAAACACTGAGGCATGTGCTTGAC
ATTCTAGAAACTCAGGGGTGGGGAGGGGTGAACTGTTTGTTAGGCAACACACTGGATCTG
AGGCCTTTACTGAGCTGAACATCCTGACGCTCTACTGTCGTCTCATTGGATTCTTCTTTT
TTGATAGCGGGAGGAAGTATGACTAATGCTAGAGCCTGAAACTATGGAAATGCTGCTAAA
ATTTTTATATTGACAAACATTTTCTCGGTACTTCATTGTGATTTTTCATTAATCAACCAC
ATTAAATTTATAATAAAAAAATGCCCCTCAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
212-309, + strand, RNAmicro p=0.99031 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
212-309, + strand, RNAmicro p=0.99031 |
|
2-513, gnl|bosTau2|chr27 (23727045-23726509) |
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2-513, gnl|canFam2|chr16 (26222926-26222271) |
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2-513, gnl|dasNov1|scaffold_4113 (46846-46113) |
|
2-513, gnl|echTel1|scaffold_308822 (2167-1557) |
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2-513, gnl|galGal2|chr4 (34704858-34704145) |
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2-513, gnl|hg17|chr8 (42393098-42393778) |
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2-513, gnl|Hg17|chr8 (42393707-42393150) |
|
2-513, gnl|loxAfr1|scaffold_12573 (17274-18020) |
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2-513, gnl|mm7|chr8 (21354959-21354352) |
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2-513, gnl|Mm7|chr8 (21354434-21354928) |
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2-513, gnl|monDom2|scaffold_1 (79517714-79516936) |
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2-513, gnl|oryCun1|scaffold_157208 (3451-4162) |
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2-513, gnl|panTro1|chr7 (43815120-43815796) |
|
2-513, gnl|rheMac2|chr8 (43008152-43008830) |
|
2-513, gnl|rn3|chr16 (73949153-73949796) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-513, gnl|bosTau2|chr27 (23727045-23726509) |
|
2-513, gnl|canFam2|chr16 (26222926-26222271) |
|
2-513, gnl|dasNov1|scaffold_4113 (46846-46113) |
|
2-513, gnl|echTel1|scaffold_308822 (2167-1557) |
|
2-513, gnl|galGal2|chr4 (34704858-34704145) |
|
2-513, gnl|hg17|chr8 (42393098-42393778) |
|
2-513, gnl|Hg17|chr8 (42393707-42393150) |
|
2-513, gnl|loxAfr1|scaffold_12573 (17274-18020) |
|
2-513, gnl|mm7|chr8 (21354959-21354352) |
|
2-513, gnl|Mm7|chr8 (21354434-21354928) |
|
2-513, gnl|monDom2|scaffold_1 (79517714-79516936) |
|
2-513, gnl|oryCun1|scaffold_157208 (3451-4162) |
|
2-513, gnl|panTro1|chr7 (43815120-43815796) |
|
2-513, gnl|rheMac2|chr8 (43008152-43008830) |
|
2-513, gnl|rn3|chr16 (73949153-73949796) |
|
cbe (0.478469) |
|
hea (0.204499) |
|
ton (0.1755) |
|
bfe (0.149858) |
|
cbe (0.478469) |
|
hea (0.204499) |
|
ton (0.1755) |
|
bfe (0.149858) |
