Ss1.1-Pig4-TMW8035J13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTGACAGCACCAGCTCTGGCACCAGCCAGGGAGAGTCCAGCCCCACCCCTTCATCAGCC CAGGCTCCCGGAGGCCAAGGGGCGAACACAGACTGCAGGCTGCCCAACGACGCCGTGTTT GATATCATCACGGATGAGGAGTTGTGCCAGATACAGGAGTCCGGCTCCTCCTTGCCTGAA ACACCTACCGAAGTGGATTCTCTTGACCCAAACGTGGCCGAACAGGACATCACATCAAAC TCACTAACCCCTGAGGACACTGAAGACATGCCCATGGGGCAGGATGCTGAAATCTGCTTG CTAAAGTCAGGCGAACTGATGATAAAACTACCCCTCACAGTGGAAGAGATCGCCAACTTC GGGGAGGGCAATAGGGAGTTGTTTGTGAGGTCCAGTACCTACAGCCTCATCCCCATCAGC GTGGCCGAGCCAGGCCTCACCATCAGCTGGGTCTTCTCCTCTGACCCCAAGAGTATCTCC TTCAGCGTGGTCTTCCGGGAGGCAGAGGACACGCCATTGGATCAGTGTAAGGTGCTCATT CCCACCACCCGATGCAATTCCCACAAGGAAAACATCCAGGGTCAGCTCAAGGTCCGCACA CCAGGCATCTACATGCTCATCTTTGACAACACCTTTTCCAGGTTTGTCTCCAAGAAAGTA TTTTATCACTTAACAGTTGACCGGCCTGTGATCTATGATGGAAGTGATTTCCCGTAGCCT GGATTTTAATAGTTTCACATTACCCACAGGAAACACTACTCTTCCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTGACAGCACCAGCTCTGGCACCAGCCAGGGAGAGTCCAGCCCCACCCCTTCATCAGCC CAGGCTCCCGGAGGCCAAGGGGCGAACACAGACTGCAGGCTGCCCAACGACGCCGTGTTT GATATCATCACGGATGAGGAGTTGTGCCAGATACAGGAGTCCGGCTCCTCCTTGCCTGAA ACACCTACCGAAGTGGATTCTCTTGACCCAAACGTGGCCGAACAGGACATCACATCAAAC TCACTAACCCCTGAGGACACTGAAGACATGCCCATGGGGCAGGATGCTGAAATCTGCTTG CTAAAGTCAGGCGAACTGATGATAAAACTACCCCTCACAGTGGAAGAGATCGCCAACTTC GGGGAGGGCAATAGGGAGTTGTTTGTGAGGTCCAGTACCTACAGCCTCATCCCCATCAGC GTGGCCGAGCCAGGCCTCACCATCAGCTGGGTCTTCTCCTCTGACCCCAAGAGTATCTCC TTCAGCGTGGTCTTCCGGGAGGCAGAGGACACGCCATTGGATCAGTGTAAGGTGCTCATT CCCACCACCCGATGCAATTCCCACAAGGAAAACATCCAGGGTCAGCTCAAGGTCCGCACA CCAGGCATCTACATGCTCATCTTTGACAACACCTTTTCCAGGTTTGTCTCCAAGAAAGTA TTTTATCACTTAACAGTTGACCGGCCTGTGATCTATGATGGAAGTGATTTCCCGTAGCCT GGATTTTAATAGTTTCACATTACCCACAGGAAACACTACTCTTCCTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 68-237, gnl|bosTau2|chr11 (79548562-79548398) | |
| 68-237, gnl|Hg17|chr3 (45971900-45971731) | |
| 68-237, gnl|Mm7|chr9 (123538006-123537834) | |
| 321-534, gnl|bosTau2|chr22 (42093525-42093738) | |
| 321-534, gnl|canFam2|chr20 (45580810-45580603) | |
| 321-534, gnl|danRer3|chrNA (220748919-220748712) | |
| 321-534, gnl|fr1|chrUn (228337723-228337518) | |
| 321-534, gnl|galGal2|chr2 (41870461-41870254) | |
| 321-534, gnl|hg17|chr3 (45947564-45947771) | |
| 321-534, gnl|Hg17|chr3 (45947777-45947564) | |
| 321-534, gnl|loxAfr1|scaffold_1332 (119780-119573) | |
| 321-534, gnl|mm7|chr9 (123515913-123516119) | |
| 321-534, gnl|Mm7|chr9 (123516125-123515912) | |
| 321-534, gnl|monDom2|scaffold_7 (66677291-66677498) | |
| 321-534, gnl|oryCun1|scaffold_213729 (47305-47511) | |
| 321-534, gnl|panTro1|chr2 (47296522-47296729) | |
| 321-534, gnl|rheMac2|chr2 (90597928-90597721) | |
| 321-534, gnl|rn3|chr8 (128571476-128571682) | |
| 321-534, gnl|tetNig1|chrUn_random (42256223-42256429) | |
| 640-768, gnl|bosTau2|chr22 (42105346-42105483) | |
| 640-768, gnl|Hg17|chr3 (45938338-45938208) | |
| 640-768, gnl|Mm7|chr9 (123511062-123510925) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 68-237, gnl|bosTau2|chr11 (79548562-79548398) | |
| 68-237, gnl|Hg17|chr3 (45971900-45971731) | |
| 68-237, gnl|Mm7|chr9 (123538006-123537834) | |
| 321-534, gnl|bosTau2|chr22 (42093525-42093738) | |
| 321-534, gnl|canFam2|chr20 (45580810-45580603) | |
| 321-534, gnl|danRer3|chrNA (220748919-220748712) | |
| 321-534, gnl|fr1|chrUn (228337723-228337518) | |
| 321-534, gnl|galGal2|chr2 (41870461-41870254) | |
| 321-534, gnl|hg17|chr3 (45947564-45947771) | |
| 321-534, gnl|Hg17|chr3 (45947777-45947564) | |
| 321-534, gnl|loxAfr1|scaffold_1332 (119780-119573) | |
| 321-534, gnl|mm7|chr9 (123515913-123516119) | |
| 321-534, gnl|Mm7|chr9 (123516125-123515912) | |
| 321-534, gnl|monDom2|scaffold_7 (66677291-66677498) | |
| 321-534, gnl|oryCun1|scaffold_213729 (47305-47511) | |
| 321-534, gnl|panTro1|chr2 (47296522-47296729) | |
| 321-534, gnl|rheMac2|chr2 (90597928-90597721) | |
| 321-534, gnl|rn3|chr8 (128571476-128571682) | |
| 321-534, gnl|tetNig1|chrUn_random (42256223-42256429) | |
| 640-768, gnl|bosTau2|chr22 (42105346-42105483) | |
| 640-768, gnl|Hg17|chr3 (45938338-45938208) | |
| 640-768, gnl|Mm7|chr9 (123511062-123510925) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| mas (0.42061) | |
| sme (0.305437) | |
| ton (0.1755) | |
| tbr (0.154178) | |
| isp (0.150376) | |
| nmm (0.132802) | |
| jej (0.0989218) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.42061) | |
| sme (0.305437) | |
| ton (0.1755) | |
| tbr (0.154178) | |
| isp (0.150376) | |
| nmm (0.132802) | |
| jej (0.0989218) |