Non-Coding RNA Search

Ss1.1-Pig4-TMW8035L18.3

Sequence:


               
               TATGCTGCAGGTTGTGGCCCTGAAAAGACAAAAAGACCAAATAAATAAATAAAGTATCAG
TTAGCTGTAACCTAGTATGTACCAGTCATGACTAATGCAGGATCCCAGGTCACTGCAGTT
GTATTTCCTGTGGCCTCAGTGTTGCAAGATCAGGATTAACAGGGATAATTCATTCCTGTG
TTCAAGCCTCTGATTTTTCATTCATGGAAGCAGTAGGTGAGAACGGACCTCAGCCCAACA
CAGGTGCAAGAGATGAGTAATAGTAACAACAGTAGCTGACACTGTTAGCTGGGCACCGTA
TGCCAGGCACCAGGCCAAGTACTTTACGTGGCTGTCTGTTTTAATAAACAATCCTGTGTG
GCAGGTATTATTACTATACCCATTTTACAGATAGGAAACTGTGGATTAGCGAGGTTACAT
CATTTCTTCCACGATTACACAGCTAGTTAAGTGGAGGAGCCAGGATTCAAATCACAGCAC
TCTGGCTCCTGAACCTAAACTCTTCATTTGTATCCTATTCGGTTTCCATAAATGACTCAT
CTTCTGGAGGTATTGTTACCCTTTGGGGGCCACTCAGTTTCATGTAGGCAGTTATCTTTT
GTGGTGGTTTTGGTGTTTCAGGGAGGGTGGATGCAGCCCCAAAGCTGGGCATCTTCATGC
CTTACCTTGCCCCAGATCACCTGGTTGGTTACAGCTTGGCACTAATGGTACATCTTACCA
CAACCCGCCCCCCGCCCCCCCAGGCTCCAGCCAACATGCTGCTGGTTATAAGACAAGAGT
ATGTCCGTAAAAGGTAATTAACAAAGCAACTATTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGCTGCAGGTTGTGGCCCTGAAAAGACAAAAAGACCAAATAAATAAATAAAGTATCAG
TTAGCTGTAACCTAGTATGTACCAGTCATGACTAATGCAGGATCCCAGGTCACTGCAGTT
GTATTTCCTGTGGCCTCAGTGTTGCAAGATCAGGATTAACAGGGATAATTCATTCCTGTG
TTCAAGCCTCTGATTTTTCATTCATGGAAGCAGTAGGTGAGAACGGACCTCAGCCCAACA
CAGGTGCAAGAGATGAGTAATAGTAACAACAGTAGCTGACACTGTTAGCTGGGCACCGTA
TGCCAGGCACCAGGCCAAGTACTTTACGTGGCTGTCTGTTTTAATAAACAATCCTGTGTG
GCAGGTATTATTACTATACCCATTTTACAGATAGGAAACTGTGGATTAGCGAGGTTACAT
CATTTCTTCCACGATTACACAGCTAGTTAAGTGGAGGAGCCAGGATTCAAATCACAGCAC
TCTGGCTCCTGAACCTAAACTCTTCATTTGTATCCTATTCGGTTTCCATAAATGACTCAT
CTTCTGGAGGTATTGTTACCCTTTGGGGGCCACTCAGTTTCATGTAGGCAGTTATCTTTT
GTGGTGGTTTTGGTGTTTCAGGGAGGGTGGATGCAGCCCCAAAGCTGGGCATCTTCATGC
CTTACCTTGCCCCAGATCACCTGGTTGGTTACAGCTTGGCACTAATGGTACATCTTACCA
CAACCCGCCCCCCGCCCCCCCAGGCTCCAGCCAACATGCTGCTGGTTATAAGACAAGAGT
ATGTCCGTAAAAGGTAATTAACAAAGCAACTATTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               53-816, gnl|bosTau2|chr4 (51118701-51117958)
               

               
               53-816, gnl|Hg17|chr7 (130045807-130045101)
               

               
               53-816, gnl|Mm7|chr6 (31011808-31011178)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-816, gnl|bosTau2|chr4 (51118701-51117958)
               

               
               53-816, gnl|Hg17|chr7 (130045807-130045101)
               

               
               53-816, gnl|Mm7|chr6 (31011808-31011178)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	53-816, gnl\|bosTau2\|chr4 (51118701-51117958)
	53-816, gnl\|Hg17\|chr7 (130045807-130045101)
	53-816, gnl\|Mm7\|chr6 (31011808-31011178)