Non-Coding RNA Search

Ss1.1-Pig4-TMW8035M11.3

Sequence:


               
               GAACATATTCCACTGCGCCATGACCCTGGACCAGCTCTACTTTGCCCGCCCGGTGCCGCT
GCACTCCAGCTACCGCTGCCCTCTCCCGGGGCTGTATCTCTGCGGGAGTGGGGCCCATCC
TGGAGGAGGTGTCATGGGAGCCGCTGGACGCAATGCAGCCCACGTGGTCTTCAGGGACCT
CAGGAGCATGTGACCACGGACCAACCCAGGAAGATGAATTCACCCTTGCGATGTTTAAGT
CCCCATGGGGTCAGCCTCCCAGGATATGGCCTGAGGCAGTCAGGTTCTCAGGGCTCAAGT
CACTGTCGTAGAAGAAATGCACACGTTACATTTGGTCCTAGTTAACCTTGCACCCCTGGC
TCCATGAATGACCTGGCTTTGTGGTATTGATAGCAGTGTTTTCTACAGAGAGTTTGCAGT
TTTCTCTCTCTGTTAGTAGAGTAGGTAATATGGAAGAACTATGTGAGATAAACTTGTCTG
GGATGCTTAGTCATCTCACATCCTCAGCTCCAAACAGACCATTTGACCAACCAGCGTCCT
CTCCTCACTGCTGGGCCCGCTAGCAGCTGCCTGGGAGAGGCCCAATCTACTGTGTCACTT
TCCTGGCCAACTATAAGAAAGGATGCAGTCCCAGTGCCCCACAAAGTCACCCGCAGGGGC
CTGAGCAGTGCTTGGCCTCTCCAGCTGTCAAAACTGCCAGGATCAGGCAAATAGGAGTCA
GGAGTGAGCGCAGAGCAGGAGCAGGTTTGGGAGATCAGGGGGCCCACATTCCGGAGTAGT
GAGGTTCAACCTATTACCTCCCATGAGCCAGCTTGACCTGTTTCATCAATGAAACCTTTT
CTACATAAACTTGTGTTATTTTAAAGTGAGACGGGTGGTCACACTCAGTCATAAAGAGTT
ACACAAATGTACCCTGTGGTAACGCACCTCTATCAGCCACCTTCCCTATCCCAGCAGCCA
AGGCCGTGGTCCAGAGGCCCCATCAACAGAGGAGGCAGAAGTGTTCCCTGAGACCTGGCT
TCCCTGTTCTCCCCGGACAAATTTAGGCAAAGGAATGCATACGTGCGTTATTAGTTAACC
TCAGTAAACTCAGATTCGTCATCTGTAGAGGAGTCGTTTTAAAGATCAAATAAGACAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACATATTCCACTGCGCCATGACCCTGGACCAGCTCTACTTTGCCCGCCCGGTGCCGCT
GCACTCCAGCTACCGCTGCCCTCTCCCGGGGCTGTATCTCTGCGGGAGTGGGGCCCATCC
TGGAGGAGGTGTCATGGGAGCCGCTGGACGCAATGCAGCCCACGTGGTCTTCAGGGACCT
CAGGAGCATGTGACCACGGACCAACCCAGGAAGATGAATTCACCCTTGCGATGTTTAAGT
CCCCATGGGGTCAGCCTCCCAGGATATGGCCTGAGGCAGTCAGGTTCTCAGGGCTCAAGT
CACTGTCGTAGAAGAAATGCACACGTTACATTTGGTCCTAGTTAACCTTGCACCCCTGGC
TCCATGAATGACCTGGCTTTGTGGTATTGATAGCAGTGTTTTCTACAGAGAGTTTGCAGT
TTTCTCTCTCTGTTAGTAGAGTAGGTAATATGGAAGAACTATGTGAGATAAACTTGTCTG
GGATGCTTAGTCATCTCACATCCTCAGCTCCAAACAGACCATTTGACCAACCAGCGTCCT
CTCCTCACTGCTGGGCCCGCTAGCAGCTGCCTGGGAGAGGCCCAATCTACTGTGTCACTT
TCCTGGCCAACTATAAGAAAGGATGCAGTCCCAGTGCCCCACAAAGTCACCCGCAGGGGC
CTGAGCAGTGCTTGGCCTCTCCAGCTGTCAAAACTGCCAGGATCAGGCAAATAGGAGTCA
GGAGTGAGCGCAGAGCAGGAGCAGGTTTGGGAGATCAGGGGGCCCACATTCCGGAGTAGT
GAGGTTCAACCTATTACCTCCCATGAGCCAGCTTGACCTGTTTCATCAATGAAACCTTTT
CTACATAAACTTGTGTTATTTTAAAGTGAGACGGGTGGTCACACTCAGTCATAAAGAGTT
ACACAAATGTACCCTGTGGTAACGCACCTCTATCAGCCACCTTCCCTATCCCAGCAGCCA
AGGCCGTGGTCCAGAGGCCCCATCAACAGAGGAGGCAGAAGTGTTCCCTGAGACCTGGCT
TCCCTGTTCTCCCCGGACAAATTTAGGCAAAGGAATGCATACGTGCGTTATTAGTTAACC
TCAGTAAACTCAGATTCGTCATCTGTAGAGGAGTCGTTTTAAAGATCAAATAAGACAATA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               114-1024, gnl|bosTau2|chr26 (9934759-9935661)
               

               
               114-1024, gnl|Hg17|chr10 (100133624-100132374)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               114-1024, gnl|bosTau2|chr26 (9934759-9935661)
               

               
               114-1024, gnl|Hg17|chr10 (100133624-100132374)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               mcp (0.170648)
               

               
               cje (0.165235)
               

               
               lnt (0.142308)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               cje (0.165235)
               

               
               lnt (0.142308)

	114-1024, gnl\|bosTau2\|chr26 (9934759-9935661)
	114-1024, gnl\|Hg17\|chr10 (100133624-100132374)