Ss1.1-Pig4-TMW8035O04.5
|
GGAGAACTACCTGGGCAACTCGCTGATGGCCCCGGTGGGCCGCTGGCATGGGCAGGATCA
GTTTAGCTGGGAGGATGTGAAGACTGACAAACAGAGGGAGAACTACCTGGGCAACTCGCT
GATGGCCCCGGTGGGCCGCTGGCAGAAGGGCCGTGACCTCACCTGGTACGCCAAGGGCCG
GGCGCACGGCGCGGGGTTGAGCCGGGAACAGGAGCTGGAGGCCGTGAGGCAGGCGGAGCA
GGAAGCGCTTATGGCAGCGTTAGGCTACAAGAACGTAAGGAAGCAGCCCACGGGCCTGAG
CAAGGAGGACTTTGTCGAAGTCTGTAAGCGGGAAGGAAGTGACCCCGAGAAGGGAGTGGA
CCGGCTCCTGGGCCTGGGCAGCTCCAGTGGCTCTGCAGGGCGAGTGGCGCTGTCACGGGA
AGACAAAGAGGCCGCTAAACTGGGGCTTTCGGTGTTCACGCACCACCGCGTGGAGAGCAG
TCGGCCAGGGGTCTCCCTGGCTTCGGCCAAGAGGAAGCCTCGGTCAGAGGAGAAGGTGGA
GCCAGGCCCTGAGAGCCACAGGAAGAGCAAGAAAGAGAAGAAAAAGAAGAAAAAACACAA
GAAAGAGAAGAGAAAGAAAGAAAAGGAGCATGGGAGGGGGTCACATTCCTCACTGTCCCC
TTCTTCCATCCAGCATGATCCCAACTCCTCGCCTTGTTGCAAGAGGAAGCGCCGGCAGGA
CAGCAACTGAGATCCAGAGATCTGAAGGGCTAGCCTATGGGGATCACCCCAGGCCTCGAA
AGAGGCTTAACTGTGGCCTACTACGGCTGCTTTTATTTTTCTTTGTATTGACTCACTCTT
TGTACGTAAATAAACTTATTTTAAGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAGAACTACCTGGGCAACTCGCTGATGGCCCCGGTGGGCCGCTGGCATGGGCAGGATCA
GTTTAGCTGGGAGGATGTGAAGACTGACAAACAGAGGGAGAACTACCTGGGCAACTCGCT
GATGGCCCCGGTGGGCCGCTGGCAGAAGGGCCGTGACCTCACCTGGTACGCCAAGGGCCG
GGCGCACGGCGCGGGGTTGAGCCGGGAACAGGAGCTGGAGGCCGTGAGGCAGGCGGAGCA
GGAAGCGCTTATGGCAGCGTTAGGCTACAAGAACGTAAGGAAGCAGCCCACGGGCCTGAG
CAAGGAGGACTTTGTCGAAGTCTGTAAGCGGGAAGGAAGTGACCCCGAGAAGGGAGTGGA
CCGGCTCCTGGGCCTGGGCAGCTCCAGTGGCTCTGCAGGGCGAGTGGCGCTGTCACGGGA
AGACAAAGAGGCCGCTAAACTGGGGCTTTCGGTGTTCACGCACCACCGCGTGGAGAGCAG
TCGGCCAGGGGTCTCCCTGGCTTCGGCCAAGAGGAAGCCTCGGTCAGAGGAGAAGGTGGA
GCCAGGCCCTGAGAGCCACAGGAAGAGCAAGAAAGAGAAGAAAAAGAAGAAAAAACACAA
GAAAGAGAAGAGAAAGAAAGAAAAGGAGCATGGGAGGGGGTCACATTCCTCACTGTCCCC
TTCTTCCATCCAGCATGATCCCAACTCCTCGCCTTGTTGCAAGAGGAAGCGCCGGCAGGA
CAGCAACTGAGATCCAGAGATCTGAAGGGCTAGCCTATGGGGATCACCCCAGGCCTCGAA
AGAGGCTTAACTGTGGCCTACTACGGCTGCTTTTATTTTTCTTTGTATTGACTCACTCTT
TGTACGTAAATAAACTTATTTTAAGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
|
110-259, gnl|bosTau2|chr7 (1678736-1678587) |
|
110-259, gnl|Hg17|chr1 (224597486-224597337) |
|
110-259, gnl|Mm7|chr11 (59290069-59290216) |
| |
|
548-673, gnl|bosTau2|chr7 (1677234-1677112) |
|
548-673, gnl|canFam2|chr14 (3784125-3783897) |
|
548-673, gnl|hg17|chr1 (224595698-224595932) |
|
548-673, gnl|Hg17|chr1 (224595908-224595778) |
|
548-673, gnl|mm7|chr11 (59291766-59291499) |
|
548-673, gnl|oryCun1|scaffold_169913 (7074-6832) |
|
548-673, gnl|panTro1|chr1 (208380477-208380709) |
|
548-673, gnl|rheMac2|chr1 (142282314-142282084) |
|
548-673, gnl|rn3|chr10 (45528139-45527873) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
110-259, gnl|bosTau2|chr7 (1678736-1678587) |
|
110-259, gnl|Hg17|chr1 (224597486-224597337) |
|
110-259, gnl|Mm7|chr11 (59290069-59290216) |
| |
|
548-673, gnl|bosTau2|chr7 (1677234-1677112) |
|
548-673, gnl|canFam2|chr14 (3784125-3783897) |
|
548-673, gnl|hg17|chr1 (224595698-224595932) |
|
548-673, gnl|Hg17|chr1 (224595908-224595778) |
|
548-673, gnl|mm7|chr11 (59291766-59291499) |
|
548-673, gnl|oryCun1|scaffold_169913 (7074-6832) |
|
548-673, gnl|panTro1|chr1 (208380477-208380709) |
|
548-673, gnl|rheMac2|chr1 (142282314-142282084) |
|
548-673, gnl|rn3|chr10 (45528139-45527873) |
|
fcc (0.593354) |
|
ece (0.45861) |
|
col (0.390016) |
|
ill (0.351185) |
|
fbs (0.350693) |
|
fli (0.202881) |
|
mcp (0.170648) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
cje (0.165235) |
|
eli (0.151814) |
|
cag (0.151194) |
|
che (0.136314) |
|
ute (0.132784) |
|
cly (0.120642) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
fcc (0.593354) |
|
ece (0.45861) |
|
col (0.390016) |
|
ill (0.351185) |
|
fbs (0.350693) |
|
fli (0.202881) |
|
mcp (0.170648) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
cje (0.165235) |
|
eli (0.151814) |
|
cag (0.151194) |
|
che (0.136314) |
|
ute (0.132784) |
|
cly (0.120642) |
|
ecc (0.115035) |
|
jca (0.11396) |
