Ss1.1-Pig4-TMW8035P24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATGGAACTCTCCTCTGCTAGAAGCACTTTTAGATTCACTATTCAAGGTCACGACGGCAA AGTGTACATCCTGCTGTGGCTTTTAAACTCAGACAGTTTGGTGATTGACTCTTTGGGAAG TTCGACAAATATTAAAAAATTTGCTCTGTTGGAAGACGTATTGAAGGCCAATTCCAGTTC AGCCCGGAATGCTGTCAAGGTCCTCTACCAGCCATGCATCAAAAGCAGGAACGAAAGGCT TGCCAGCTCATGGGAAAGTGACATCAGCGTGCATGCCCTCACCCTGCCCTCTGCGACCTG CCTGGAGCTGCTGTTGGTATTATTAAGGAGTAGCGCCACTCTGCCTGCATCCCTTCGCCA TGTGAATTCTTTCCAGGTAGCCTTTTTGAAGATGTAACCATGGGAGCCAACACATTCCTA TCCACATCCCGGGCTGCTCTGGAGGCCAGCCATCAGCCCAGCGGGCAGCGGTTGCAGAGA CCAGAACCCAGCCACAGATTGAGAACAGGACACTGCAGTTTTGAGTTTACTTGTTTGCAT ATATTCTCTAACAGAACAGTTAACTTGAAATCTTTGAAAAGCCAAGGCTGTGAAGAAATC ATAGAAGCAGGTTGAGAGATAAGTATAGAATTTACACCTCTATTTCCCACCAAGAGGAAT ATTCAAATATGTCAACACCACCTGAGGAGGTCAAGCTGTGCCGAGAGGGGCTTCATTGGT GGAACTGGATGTTGGCTGCTGTACACCCTAGGACATAAACCTTCTGAAAACGTCTCAGGT TTGTGTAACAACATTTTTTTTAAATAAAATATGGAACTTTGTGTACTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATGGAACTCTCCTCTGCTAGAAGCACTTTTAGATTCACTATTCAAGGTCACGACGGCAA AGTGTACATCCTGCTGTGGCTTTTAAACTCAGACAGTTTGGTGATTGACTCTTTGGGAAG TTCGACAAATATTAAAAAATTTGCTCTGTTGGAAGACGTATTGAAGGCCAATTCCAGTTC AGCCCGGAATGCTGTCAAGGTCCTCTACCAGCCATGCATCAAAAGCAGGAACGAAAGGCT TGCCAGCTCATGGGAAAGTGACATCAGCGTGCATGCCCTCACCCTGCCCTCTGCGACCTG CCTGGAGCTGCTGTTGGTATTATTAAGGAGTAGCGCCACTCTGCCTGCATCCCTTCGCCA TGTGAATTCTTTCCAGGTAGCCTTTTTGAAGATGTAACCATGGGAGCCAACACATTCCTA TCCACATCCCGGGCTGCTCTGGAGGCCAGCCATCAGCCCAGCGGGCAGCGGTTGCAGAGA CCAGAACCCAGCCACAGATTGAGAACAGGACACTGCAGTTTTGAGTTTACTTGTTTGCAT ATATTCTCTAACAGAACAGTTAACTTGAAATCTTTGAAAAGCCAAGGCTGTGAAGAAATC ATAGAAGCAGGTTGAGAGATAAGTATAGAATTTACACCTCTATTTCCCACCAAGAGGAAT ATTCAAATATGTCAACACCACCTGAGGAGGTCAAGCTGTGCCGAGAGGGGCTTCATTGGT GGAACTGGATGTTGGCTGCTGTACACCCTAGGACATAAACCTTCTGAAAACGTCTCAGGT TTGTGTAACAACATTTTTTTTAAATAAAATATGGAACTTTGTGTACTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
| 73-231, gnl|bosTau2|chr9 (9898859-9898701) | |
| 73-231, gnl|canFam2|chr12 (46433408-46433601) | |
| 73-231, gnl|echTel1|scaffold_274366 (5898-6093) | |
| 73-231, gnl|galGal2|chr3 (76357295-76357098) | |
| 73-231, gnl|hg17|chr6 (83785379-83785574) | |
| 73-231, gnl|Hg17|chr6 (83785575-83785417) | |
| 73-231, gnl|loxAfr1|scaffold_15392 (47171-46976) | |
| 73-231, gnl|mm7|chr9 (86526164-86526359) | |
| 73-231, gnl|Mm7|chr9 (86526360-86526202) | |
| 73-231, gnl|monDom2|scaffold_0 (147169907-147169694) | |
| 73-231, gnl|oryCun1|scaffold_175712 (10849-11041) | |
| 73-231, gnl|panTro1|chr5 (85420725-85420920) | |
| 73-231, gnl|rheMac2|chr4 (79044569-79044764) | |
| 73-231, gnl|rn3|chr8 (91675609-91675804) | |
| 370-672, gnl|bosTau2|chr9 (9734931-9734630) | |
| 370-672, gnl|canFam2|chr12 (46329648-46330561) | |
| 370-672, gnl|dasNov1|scaffold_15189 (18749-19687) | |
| 370-672, gnl|echTel1|scaffold_314308 (35987-34976) | |
| 370-672, gnl|hg17|chr6 (83658962-83659898) | |
| 370-672, gnl|Hg17|chr6 (83659487-83659172) | |
| 370-672, gnl|loxAfr1|scaffold_63627 (30531-29586) | |
| 370-672, gnl|mm7|chr9 (86410722-86411631) | |
| 370-672, gnl|Mm7|chr9 (86411237-86410928) | |
| 370-672, gnl|monDom2|scaffold_0 (147317246-147316255) | |
| 370-672, gnl|oryCun1|scaffold_212250 (11609-10679) | |
| 370-672, gnl|panTro1|chr5 (85292669-85293605) | |
| 370-672, gnl|rheMac2|chr4 (78910826-78911757) | |
| 370-672, gnl|rn3|chr8 (91556897-91557837) | |
| 700-826, gnl|bosTau2|chr9 (9734569-9734445) | |
| 700-826, gnl|canFam2|chr12 (46329648-46330561) | |
| 700-826, gnl|dasNov1|scaffold_15189 (18749-19687) | |
| 700-826, gnl|echTel1|scaffold_314308 (35987-34976) | |
| 700-826, gnl|hg17|chr6 (83658962-83659898) | |
| 700-826, gnl|Hg17|chr6 (83659110-83658982) | |
| 700-826, gnl|loxAfr1|scaffold_63627 (30531-29586) | |
| 700-826, gnl|mm7|chr9 (86410722-86411631) | |
| 700-826, gnl|Mm7|chr9 (86410866-86410742) | |
| 700-826, gnl|monDom2|scaffold_0 (147317246-147316255) | |
| 700-826, gnl|oryCun1|scaffold_212250 (11609-10679) | |
| 700-826, gnl|panTro1|chr5 (85292669-85293605) | |
| 700-826, gnl|rheMac2|chr4 (78910826-78911757) | |
| 700-826, gnl|rn3|chr8 (91556897-91557837) |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 73-231, gnl|bosTau2|chr9 (9898859-9898701) | |
| 73-231, gnl|canFam2|chr12 (46433408-46433601) | |
| 73-231, gnl|echTel1|scaffold_274366 (5898-6093) | |
| 73-231, gnl|galGal2|chr3 (76357295-76357098) | |
| 73-231, gnl|hg17|chr6 (83785379-83785574) | |
| 73-231, gnl|Hg17|chr6 (83785575-83785417) | |
| 73-231, gnl|loxAfr1|scaffold_15392 (47171-46976) | |
| 73-231, gnl|mm7|chr9 (86526164-86526359) | |
| 73-231, gnl|Mm7|chr9 (86526360-86526202) | |
| 73-231, gnl|monDom2|scaffold_0 (147169907-147169694) | |
| 73-231, gnl|oryCun1|scaffold_175712 (10849-11041) | |
| 73-231, gnl|panTro1|chr5 (85420725-85420920) | |
| 73-231, gnl|rheMac2|chr4 (79044569-79044764) | |
| 73-231, gnl|rn3|chr8 (91675609-91675804) | |
| 370-672, gnl|bosTau2|chr9 (9734931-9734630) | |
| 370-672, gnl|canFam2|chr12 (46329648-46330561) | |
| 370-672, gnl|dasNov1|scaffold_15189 (18749-19687) | |
| 370-672, gnl|echTel1|scaffold_314308 (35987-34976) | |
| 370-672, gnl|hg17|chr6 (83658962-83659898) | |
| 370-672, gnl|Hg17|chr6 (83659487-83659172) | |
| 370-672, gnl|loxAfr1|scaffold_63627 (30531-29586) | |
| 370-672, gnl|mm7|chr9 (86410722-86411631) | |
| 370-672, gnl|Mm7|chr9 (86411237-86410928) | |
| 370-672, gnl|monDom2|scaffold_0 (147317246-147316255) | |
| 370-672, gnl|oryCun1|scaffold_212250 (11609-10679) | |
| 370-672, gnl|panTro1|chr5 (85292669-85293605) | |
| 370-672, gnl|rheMac2|chr4 (78910826-78911757) | |
| 370-672, gnl|rn3|chr8 (91556897-91557837) | |
| 700-826, gnl|bosTau2|chr9 (9734569-9734445) | |
| 700-826, gnl|canFam2|chr12 (46329648-46330561) | |
| 700-826, gnl|dasNov1|scaffold_15189 (18749-19687) | |
| 700-826, gnl|echTel1|scaffold_314308 (35987-34976) | |
| 700-826, gnl|hg17|chr6 (83658962-83659898) | |
| 700-826, gnl|Hg17|chr6 (83659110-83658982) | |
| 700-826, gnl|loxAfr1|scaffold_63627 (30531-29586) | |
| 700-826, gnl|mm7|chr9 (86410722-86411631) | |
| 700-826, gnl|Mm7|chr9 (86410866-86410742) | |
| 700-826, gnl|monDom2|scaffold_0 (147317246-147316255) | |
| 700-826, gnl|oryCun1|scaffold_212250 (11609-10679) | |
| 700-826, gnl|panTro1|chr5 (85292669-85293605) | |
| 700-826, gnl|rheMac2|chr4 (78910826-78911757) | |
| 700-826, gnl|rn3|chr8 (91556897-91557837) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) | |
| ecc (0.115035) |