Ss1.1-Pig4-TMW8036B13.3
|
CTGTCCTGCACCAGGGCCACAGCAACTCCAGGTCTGAACTTGTATCTGCGATGCAGCTTG
AGGCAGCACTAGATCCTTAACCCACTGAGCAGGGCCAGGGATCGAACCTGCATCCTCACA
GACAGTATGTCAGATTCTTAACCCTCTGAGCCACGATGGGAACTCCTATAATGGATCAGT
TTCTGAAGTTGCCTTAGCAAAGGGTGATATTTATCAACTTGATCAGTAGCTCTGATAGAT
GTTTGTTAAATGTGTCTACCTCCAATCAAAAAAAGAATACTAAATGAAACTTTTTTTTTT
TTTTTTGGTAAAGTTAGTCAGTCTACTTTTACTGTTAGTGAATTCATCAGTTTATCCAGT
TGCAAACCTAAATAAATATGTTGGACCCCAAATTAGCCAAACTTTATTGTGCCATGTTCC
TACTTTTTAAACCTTCCTTTCATACAGTGTTATACTAATTTTTTTACTTTTTTAACCTCT
TGATCTTTAGAAAGATTTTCCATAATGAAGATTATTATCAATTGAGATTTAAATAACAAT
GTCCTCAATTGATTCTTTTATTAATACAACCAAATAGACCATTGATTTTTAGCCATGAAT
ATACTAAGTAACAGTGTTCCCACGCCTGTAGGACTTCGGCAACACAGCCTCGCCAGAAGT
TAAACCCATGTTGCATTTGTGTACTTCCCCCCCCTTCCAAATGGGTCTTTGTTATCTTAA
ATGTGAGAATACTTTGTAGGTTCTTTTCTCAATTCTTTTGTATATTTGAAACTTTTGCTT
AAAAATTAACCTATAGCCTGCATATTTGAATACATATGGGCTTTTCTTTTATGAGTATTA
AAGGATTTTATTGGATCTTTCTGGGATATTTTCTGATCAGCATCATTTGGGTCCCTTAAG
AAGACAGAAGCAGTTGCCCAGTTCATGGAAGAATCTGAGATGCCGGGGAATACCTAGGTT
ATTTAATAATGAAGAGCCCACAGCCCCAAACAAGTTAGGCTATGGAATAAATATGTGTTT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGTCCTGCACCAGGGCCACAGCAACTCCAGGTCTGAACTTGTATCTGCGATGCAGCTTG
AGGCAGCACTAGATCCTTAACCCACTGAGCAGGGCCAGGGATCGAACCTGCATCCTCACA
GACAGTATGTCAGATTCTTAACCCTCTGAGCCACGATGGGAACTCCTATAATGGATCAGT
TTCTGAAGTTGCCTTAGCAAAGGGTGATATTTATCAACTTGATCAGTAGCTCTGATAGAT
GTTTGTTAAATGTGTCTACCTCCAATCAAAAAAAGAATACTAAATGAAACTTTTTTTTTT
TTTTTTGGTAAAGTTAGTCAGTCTACTTTTACTGTTAGTGAATTCATCAGTTTATCCAGT
TGCAAACCTAAATAAATATGTTGGACCCCAAATTAGCCAAACTTTATTGTGCCATGTTCC
TACTTTTTAAACCTTCCTTTCATACAGTGTTATACTAATTTTTTTACTTTTTTAACCTCT
TGATCTTTAGAAAGATTTTCCATAATGAAGATTATTATCAATTGAGATTTAAATAACAAT
GTCCTCAATTGATTCTTTTATTAATACAACCAAATAGACCATTGATTTTTAGCCATGAAT
ATACTAAGTAACAGTGTTCCCACGCCTGTAGGACTTCGGCAACACAGCCTCGCCAGAAGT
TAAACCCATGTTGCATTTGTGTACTTCCCCCCCCTTCCAAATGGGTCTTTGTTATCTTAA
ATGTGAGAATACTTTGTAGGTTCTTTTCTCAATTCTTTTGTATATTTGAAACTTTTGCTT
AAAAATTAACCTATAGCCTGCATATTTGAATACATATGGGCTTTTCTTTTATGAGTATTA
AAGGATTTTATTGGATCTTTCTGGGATATTTTCTGATCAGCATCATTTGGGTCCCTTAAG
AAGACAGAAGCAGTTGCCCAGTTCATGGAAGAATCTGAGATGCCGGGGAATACCTAGGTT
ATTTAATAATGAAGAGCCCACAGCCCCAAACAAGTTAGGCTATGGAATAAATATGTGTTT |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
167-1020, gnl|bosTau2|chr13 (16734734-16735593) |
|
167-1020, gnl|canFam2|chr2 (20344597-20344032) |
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167-1020, gnl|dasNov1|scaffold_13637 (16317-16898) |
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167-1020, gnl|echTel1|scaffold_317385 (82542-81920) |
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167-1020, gnl|hg17|chr10 (29011990-29012547) |
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167-1020, gnl|loxAfr1|scaffold_25132 (16198-15629) |
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167-1020, gnl|mm7|chr18 (3679113-3679589) |
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167-1020, gnl|monDom2|scaffold_7 (39747421-39746885) |
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167-1020, gnl|panTro1|chr8 (29360994-29361557) |
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167-1020, gnl|rheMac2|chr9 (28777835-28778409) |
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167-1020, gnl|rn3|chr17 (62664478-62663986) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
167-1020, gnl|bosTau2|chr13 (16734734-16735593) |
|
167-1020, gnl|canFam2|chr2 (20344597-20344032) |
|
167-1020, gnl|dasNov1|scaffold_13637 (16317-16898) |
|
167-1020, gnl|echTel1|scaffold_317385 (82542-81920) |
|
167-1020, gnl|hg17|chr10 (29011990-29012547) |
|
167-1020, gnl|loxAfr1|scaffold_25132 (16198-15629) |
|
167-1020, gnl|mm7|chr18 (3679113-3679589) |
|
167-1020, gnl|monDom2|scaffold_7 (39747421-39746885) |
|
167-1020, gnl|panTro1|chr8 (29360994-29361557) |
|
167-1020, gnl|rheMac2|chr9 (28777835-28778409) |
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167-1020, gnl|rn3|chr17 (62664478-62663986) |
|
ret (0.257467) |
|
sug (0.254582) |
|
gul (0.177588) |
|
duo (0.172801) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
pty (0.142714) |
|
kid (0.129735) |
|
ret (0.257467) |
|
sug (0.254582) |
|
gul (0.177588) |
|
duo (0.172801) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
pty (0.142714) |
|
kid (0.129735) |
