Non-Coding RNA Search

Ss1.1-Pig4-TMW8036B21.5

Sequence:


               
               GGGGCGCAGGGCTCACCTGGCCCGCGCCCCGAACACCTCGGAGGCGGCGGCGGGGGCGAG
CGGCAGCCGGGGCGGCGCCCGAGCCGACCACGAGGCCGGGAAGAATGCGGACTGTGAGTC
CTGGGTCCGAGAGAAAGTGCTCTTTCTTCTGCACCCGGAGAGGTGGTTGGGCACTCGGGG
GGACCCCGCCGGGGAAGAGGTGGCCGGTGAGGACGAGCTTTTCGAAGCGGGAGGACAAGA
TCGGGAATCGGACTGGCCTTCTCTCTTTCCACCGGAAAAGCGAATTTCTGGCAGCCGTGT
AGACGCTCCCTCTCGAGCTCCGCCAGGGGAGCCCCCCAAACCCTTCCTCGTGCGGGTCGT
GGATTATGAGATGACACAAGAAGTCCTGCAGGTCGCGTGGGCGAAGGGTTCCCTGACTAC
GCTGACCGAGGAGCGCTCCATGACCTCCGTCACTTTCCGTGCCAACAGGGAGTGAGGGAG
ATTGAGGGGCGCCGGGACCCCTGGAGATCGGCTGGCTCTCGCCGCGAACAGAGGGTTGTT
ACATGATGCCCCGGGAAGATTCAGCGGCGAAGTAACGTTCCGGGCTGTTGAAGGAGCGTT
CATCCTTAAGAAAACTCCAGCCTGTTAGTTAACCTACTGCAAGGACTTTTTAAGAGGCTG
GTGCCTGGCTCAGGGAGGCCAGAGACACCCAATGCAGATTGAAGAACTGTAAGCAACACG
ATACCTCTTTAAATACTGTGGCTTAAATACTGTGACGATCTGGGGACCTTTGAAGCGAAG
AAAGGTTTTCCTGATCCAGCAGAACTCTGTTGTGGGAGGAAGCCAAGTAATCTTCTCCCA
ATTAACTGTGTCCTGGGAGTGAATTTCCCCTTTCTCTTTAAGACCTGAAAAGCAGAAGTG
AAGTTTGAGTTCTGCTGTCTGCAAAGGGTGTGAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGCGCAGGGCTCACCTGGCCCGCGCCCCGAACACCTCGGAGGCGGCGGCGGGGGCGAG
CGGCAGCCGGGGCGGCGCCCGAGCCGACCACGAGGCCGGGAAGAATGCGGACTGTGAGTC
CTGGGTCCGAGAGAAAGTGCTCTTTCTTCTGCACCCGGAGAGGTGGTTGGGCACTCGGGG
GGACCCCGCCGGGGAAGAGGTGGCCGGTGAGGACGAGCTTTTCGAAGCGGGAGGACAAGA
TCGGGAATCGGACTGGCCTTCTCTCTTTCCACCGGAAAAGCGAATTTCTGGCAGCCGTGT
AGACGCTCCCTCTCGAGCTCCGCCAGGGGAGCCCCCCAAACCCTTCCTCGTGCGGGTCGT
GGATTATGAGATGACACAAGAAGTCCTGCAGGTCGCGTGGGCGAAGGGTTCCCTGACTAC
GCTGACCGAGGAGCGCTCCATGACCTCCGTCACTTTCCGTGCCAACAGGGAGTGAGGGAG
ATTGAGGGGCGCCGGGACCCCTGGAGATCGGCTGGCTCTCGCCGCGAACAGAGGGTTGTT
ACATGATGCCCCGGGAAGATTCAGCGGCGAAGTAACGTTCCGGGCTGTTGAAGGAGCGTT
CATCCTTAAGAAAACTCCAGCCTGTTAGTTAACCTACTGCAAGGACTTTTTAAGAGGCTG
GTGCCTGGCTCAGGGAGGCCAGAGACACCCAATGCAGATTGAAGAACTGTAAGCAACACG
ATACCTCTTTAAATACTGTGGCTTAAATACTGTGACGATCTGGGGACCTTTGAAGCGAAG
AAAGGTTTTCCTGATCCAGCAGAACTCTGTTGTGGGAGGAAGCCAAGTAATCTTCTCCCA
ATTAACTGTGTCCTGGGAGTGAATTTCCCCTTTCTCTTTAAGACCTGAAAAGCAGAAGTG
AAGTTTGAGTTCTGCTGTCTGCAAAGGGTGTGAGAG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-731, gnl|bosTau2|chr23 (19836181-19835471)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-731, gnl|bosTau2|chr23 (19836181-19835471)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               elu (0.385356)
               

               
               rec (0.17307)
               

               
               eru (0.120048)
               

               
               eje (0.0988338)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               rec (0.17307)
               

               
               eru (0.120048)
               

               
               eje (0.0988338)