Non-Coding RNA Search

Ss1.1-Pig4-TMW8036E16.3

Sequence:


               
               CGCGCGCGGCACGGCGGGAACATGGCGCGCGAGCCCGGCGCGCGCGCCTAGCTGGCGGGA
CCGTTAGCTCGAGGCGGACGCGGCCCGGGTCCCGCGGCGATGGAGCAGTCGCTGCCGCCG
GCGCCTGAGCCCATTCCGGGGTCAACCCCGGTACGGAGCCAAAGGCACCGGGAGCCCGAG
TCGCCTCCGGCGCCGGCGCCGATTCCTCTCTTTGGTGCTAAGACTGTTGGCCAGAGAAGT
CCTGATGGACCAATGCTGAGCAAAGCTGAATTTGTTGAGAAAGTTCGTCAGAGTAATCAG
GCCTGTCATGATGGAGATTTCCACACAGCTATTGTTCTGTACAATGAAGCCCTGGCTGTT
GACCCTCAGAACTGCATCTTATACAGCAATAGATCTGCAGCCTATATGAAAATCCAGCAG
TATGACAAGGCACTGGATGATGCAATCAAAGCTCGACTTCTCAATCCCAAATGGCCAAAG
CATTCTGCAGTTTCACAATGGGAATCTATTTTGAGTCTCTGTGTTCTGTTTTTCACAGGG
GGAGAAGAATGGAGTGAAACTCCCACATCTTGAAGGTGGATATTGTATAACATTGCAAGG
AGGACAAGGAAGCAAGGATAAGAGTCATAAATTGCAGCTGGAAGCTTGGAACTGATTCCT
TTACTCTGCAGTAGCTCGGAAAGGATTCGGCTCCAAGTTTAATGAACAATGAAACATGAT
CTGAAGAATTCTATGCAAGAAATACTCTGTTGCCTGGTTCTTCATGACTTCTAGTAATTT
TAACTTCTGCTCTACAGGAGCAGCAGTGCTCTTTGTTCACCTTCTCAAGATGAGCTTTTA
AAATAAAAGTTGGGACTTTTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGCGCGGCACGGCGGGAACATGGCGCGCGAGCCCGGCGCGCGCGCCTAGCTGGCGGGA
CCGTTAGCTCGAGGCGGACGCGGCCCGGGTCCCGCGGCGATGGAGCAGTCGCTGCCGCCG
GCGCCTGAGCCCATTCCGGGGTCAACCCCGGTACGGAGCCAAAGGCACCGGGAGCCCGAG
TCGCCTCCGGCGCCGGCGCCGATTCCTCTCTTTGGTGCTAAGACTGTTGGCCAGAGAAGT
CCTGATGGACCAATGCTGAGCAAAGCTGAATTTGTTGAGAAAGTTCGTCAGAGTAATCAG
GCCTGTCATGATGGAGATTTCCACACAGCTATTGTTCTGTACAATGAAGCCCTGGCTGTT
GACCCTCAGAACTGCATCTTATACAGCAATAGATCTGCAGCCTATATGAAAATCCAGCAG
TATGACAAGGCACTGGATGATGCAATCAAAGCTCGACTTCTCAATCCCAAATGGCCAAAG
CATTCTGCAGTTTCACAATGGGAATCTATTTTGAGTCTCTGTGTTCTGTTTTTCACAGGG
GGAGAAGAATGGAGTGAAACTCCCACATCTTGAAGGTGGATATTGTATAACATTGCAAGG
AGGACAAGGAAGCAAGGATAAGAGTCATAAATTGCAGCTGGAAGCTTGGAACTGATTCCT
TTACTCTGCAGTAGCTCGGAAAGGATTCGGCTCCAAGTTTAATGAACAATGAAACATGAT
CTGAAGAATTCTATGCAAGAAATACTCTGTTGCCTGGTTCTTCATGACTTCTAGTAATTT
TAACTTCTGCTCTACAGGAGCAGCAGTGCTCTTTGTTCACCTTCTCAAGATGAGCTTTTA
AAATAAAAGTTGGGACTTTTTCCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|27501211|ref|XP_209408.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|27501211|ref|XP_209408.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               529-761, gnl|bosTau2|chr19 (39221114-39220881)
               

               
               529-761, gnl|Hg17|chr22 (27129672-27129441)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               529-761, gnl|bosTau2|chr19 (39221114-39220881)
               

               
               529-761, gnl|Hg17|chr22 (27129672-27129441)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.207814)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               bla (0.124347)

	529-761, gnl\|bosTau2\|chr19 (39221114-39220881)
	529-761, gnl\|Hg17\|chr22 (27129672-27129441)