Ss1.1-Pig4-TMW8036H23.3
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ATAGAAGGCAGTGGAGCCGCCGGGACCCAGGCCGCGGCGCGCCCGCCTGCTCGTTCGCCC
GCCGCCCGCCGCCCCCCGCCCGCTCTCTCCTCCGCGCCGCGGGCCGCACCCCGCGCCCCT
CGCCGCGCCCGCGACCAAGAGCCGAGAAAGTTTGTGCGGCAAGTGCGGGCCAGAGCGGAG
GGCGCGCCCGCGGAGCGCCGCCGAGACCCGCGCGGCCCCGGCCGGCGAGAGGGGAGCTCC
CCGAGCCCAGGCGGCGGCGGCGAGCCCGAGCCCGCGCCCCCCGCCCCCCGCCCGCCATGG
GCGCCGCGGCCCGCAGCCTGCGGCTCGCGCTCGGCCTCCTGCTGCTGCTGGGGACACTGC
TCCGCCCGGCCGACGCCTGCAGCTGCTCCCCCGTGCACCCGCAACAGGCGTTTTGCAATG
CAGACGTAGTGATCAGGGCCAAGGCCGTCAGCGAGAAGGAGGTGGACTCCGGGAACGACA
TCTACGGCAACCCCATCAAACGGATCCAGTACGAAATCAAGCAGATAAAGATGTTCAAGG
GACCTGACAAGGACATAGAGTTTATCTACACGGCCCCCTCCTCCGCGGTGTGCGGCGTCT
CGCTGGACATCGGAGGAAAGAAGGAGTACCTCATCGCAGGAAAGGCCGAGGGGCACGGCA
AGATGCACATCACGCTCTGTGACTTCATCGTGCCCTGGGACACCCTGAGCACCACCCAGA
AGAAGAGCCTGAACCACAGGTACCAGATGGGCTGTGAGTGCAAGATCACGCGCTGTCCCA
TGATCCCCTGCTACATCTCCTCTCCGGACGAGTGTCTCTGGATGGACTGGGTCACGGAGA
AGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGCGACGGCTCCT
GCGCGTGGTACCGCGGAGCGGCACCCCCCAAGCAGGAGTTTCTCGACATCGAGGACCCCT
AAGCAGGCCACCGGCACCCCTGTGGCCAACAGAGAGCCTCCGAGAGTCCAGACTGGTCCA
GCTCCGACATCCCTCCCTGGAAACAGCATGAATAAAACAGTCATCCAAAAAAAAAAAAAA
AAAAAAAAAAAACCCGCCCGCCCCCATTTTCCTTTTCAATGTGCTTGTGGGTCTGGAGGC
AGAGGTGGGTCCTGCACCCCATCCCCCACCCTGGGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ATAGAAGGCAGTGGAGCCGCCGGGACCCAGGCCGCGGCGCGCCCGCCTGCTCGTTCGCCC
GCCGCCCGCCGCCCCCCGCCCGCTCTCTCCTCCGCGCCGCGGGCCGCACCCCGCGCCCCT
CGCCGCGCCCGCGACCAAGAGCCGAGAAAGTTTGTGCGGCAAGTGCGGGCCAGAGCGGAG
GGCGCGCCCGCGGAGCGCCGCCGAGACCCGCGCGGCCCCGGCCGGCGAGAGGGGAGCTCC
CCGAGCCCAGGCGGCGGCGGCGAGCCCGAGCCCGCGCCCCCCGCCCCCCGCCCGCCATGG
GCGCCGCGGCCCGCAGCCTGCGGCTCGCGCTCGGCCTCCTGCTGCTGCTGGGGACACTGC
TCCGCCCGGCCGACGCCTGCAGCTGCTCCCCCGTGCACCCGCAACAGGCGTTTTGCAATG
CAGACGTAGTGATCAGGGCCAAGGCCGTCAGCGAGAAGGAGGTGGACTCCGGGAACGACA
TCTACGGCAACCCCATCAAACGGATCCAGTACGAAATCAAGCAGATAAAGATGTTCAAGG
GACCTGACAAGGACATAGAGTTTATCTACACGGCCCCCTCCTCCGCGGTGTGCGGCGTCT
CGCTGGACATCGGAGGAAAGAAGGAGTACCTCATCGCAGGAAAGGCCGAGGGGCACGGCA
AGATGCACATCACGCTCTGTGACTTCATCGTGCCCTGGGACACCCTGAGCACCACCCAGA
AGAAGAGCCTGAACCACAGGTACCAGATGGGCTGTGAGTGCAAGATCACGCGCTGTCCCA
TGATCCCCTGCTACATCTCCTCTCCGGACGAGTGTCTCTGGATGGACTGGGTCACGGAGA
AGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGCGACGGCTCCT
GCGCGTGGTACCGCGGAGCGGCACCCCCCAAGCAGGAGTTTCTCGACATCGAGGACCCCT
AAGCAGGCCACCGGCACCCCTGTGGCCAACAGAGAGCCTCCGAGAGTCCAGACTGGTCCA
GCTCCGACATCCCTCCCTGGAAACAGCATGAATAAAACAGTCATCCAAAAAAAAAAAAAA
AAAAAAAAAAAACCCGCCCGCCCCCATTTTCCTTTTCAATGTGCTTGTGGGTCTGGAGGC
AGAGGTGGGTCCTGCACCCCATCCCCCACCCTGGGC
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94-467, gnl|bosTau2|chr18 (47727658-47728033) |
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94-467, gnl|Hg17|chr17 (74432989-74432636) |
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529-640, gnl|bosTau2|chr19 (46154829-46154718) |
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529-640, gnl|canFam2|chr9 (5521379-5521279) |
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529-640, gnl|danRer3|chr3 (44880206-44880303) |
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529-640, gnl|echTel1|scaffold_54437 (2304-2204) |
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529-640, gnl|fr1|chrUn (205946406-205946309) |
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529-640, gnl|hg17|chr17 (74378570-74378670) |
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529-640, gnl|Hg17|chr17 (74378685-74378574) |
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529-640, gnl|mm7|chr11 (118426459-118426559) |
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529-640, gnl|Mm7|chr11 (118426574-118426463) |
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529-640, gnl|monDom2|scaffold_18 (8217679-8217779) |
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529-640, gnl|oryCun1|scaffold_209472 (4116-4208) |
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529-640, gnl|panTro1|chr19 (77941612-77941712) |
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529-640, gnl|rn3|chr10 (108336265-108336365) |
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529-640, gnl|tetNig1|chr3 (10291370-10291273) |
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529-640, gnl|xenTro1|scaffold_92 (1014213-1014312) |
| |
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763-1176, gnl|bosTau2|chr19 (46143379-46142963) |
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763-1176, gnl|Hg17|chr17 (74363543-74363123) |
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763-1176, gnl|Mm7|chr11 (118412943-118412515) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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94-467, gnl|bosTau2|chr18 (47727658-47728033) |
|
94-467, gnl|Hg17|chr17 (74432989-74432636) |
| |
|
529-640, gnl|bosTau2|chr19 (46154829-46154718) |
|
529-640, gnl|canFam2|chr9 (5521379-5521279) |
|
529-640, gnl|danRer3|chr3 (44880206-44880303) |
|
529-640, gnl|echTel1|scaffold_54437 (2304-2204) |
|
529-640, gnl|fr1|chrUn (205946406-205946309) |
|
529-640, gnl|hg17|chr17 (74378570-74378670) |
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529-640, gnl|Hg17|chr17 (74378685-74378574) |
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529-640, gnl|mm7|chr11 (118426459-118426559) |
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529-640, gnl|Mm7|chr11 (118426574-118426463) |
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529-640, gnl|monDom2|scaffold_18 (8217679-8217779) |
|
529-640, gnl|oryCun1|scaffold_209472 (4116-4208) |
|
529-640, gnl|panTro1|chr19 (77941612-77941712) |
|
529-640, gnl|rn3|chr10 (108336265-108336365) |
|
529-640, gnl|tetNig1|chr3 (10291370-10291273) |
|
529-640, gnl|xenTro1|scaffold_92 (1014213-1014312) |
| |
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763-1176, gnl|bosTau2|chr19 (46143379-46142963) |
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763-1176, gnl|Hg17|chr17 (74363543-74363123) |
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763-1176, gnl|Mm7|chr11 (118412943-118412515) |
|
ute (1.32784) |
|
cov (1.32153) |
|
cut (0.679694) |
|
cag (0.453583) |
|
jca (0.34188) |
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lnt (0.284616) |
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cga (0.279096) |
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clu (0.239292) |
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nms (0.213858) |
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nlu (0.191681) |
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fbs (0.175346) |
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nca (0.136874) |
|
sug (0.127291) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
med (0.116252) |
|
eje (0.0988338) |
|
ute (1.32784) |
|
cov (1.32153) |
|
cut (0.679694) |
|
cag (0.453583) |
|
jca (0.34188) |
|
lnt (0.284616) |
|
cga (0.279096) |
|
clu (0.239292) |
|
nms (0.213858) |
|
nlu (0.191681) |
|
fbs (0.175346) |
|
nca (0.136874) |
|
sug (0.127291) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
med (0.116252) |
|
eje (0.0988338) |
