Non-Coding RNA Search

Ss1.1-Pig4-TMW8036I21.5

Sequence:


               
               GGCGATGACATATGACTGTGCTGGCAGGCAAAGGGCGAGGTGTCAAGACCCAACCCTCCT
GCACAGCAATGCCCGCCCTTCACTGCCAGCAGCCCTCGGGCGGCAGAGATGCTCTTGGGC
TGGGCAGACACCTCAGTCCTCAGCTCTTCTCTCTCGGAAACTCAGCGCCACTGGCAAGAG
AGGATGCCGTTGTGGAAAGACCCAGAAATTCACGCTGGTGCCAGGTTTTCTGCCCTTGTT
TCTACCGTATATGTTTCCAAGGGGAGCCGAGTTCTCCCTGGCTTGGGCATCAGAAGAGGC
ATTCTAGTGACTGAAAGGGTGACCCTGTGTGTCCACATCATACCCTGGCTCCATCCTAAC
CCAGTGGATGAGCCTGAGGCCTCTAGCTGGCCGTTGCTCCCCTCCTTCTTTTTGCCTCTG
TTTTTCCATCTGTAAGATGGGGCTCCCTTTCCCTGTGCTCTGTCTTTGAGTTACTGGATG
GAAGTAACCTTGTAAATGCAAAACTCTTCTTCATGCAGGTCCTGCCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGATGACATATGACTGTGCTGGCAGGCAAAGGGCGAGGTGTCAAGACCCAACCCTCCT
GCACAGCAATGCCCGCCCTTCACTGCCAGCAGCCCTCGGGCGGCAGAGATGCTCTTGGGC
TGGGCAGACACCTCAGTCCTCAGCTCTTCTCTCTCGGAAACTCAGCGCCACTGGCAAGAG
AGGATGCCGTTGTGGAAAGACCCAGAAATTCACGCTGGTGCCAGGTTTTCTGCCCTTGTT
TCTACCGTATATGTTTCCAAGGGGAGCCGAGTTCTCCCTGGCTTGGGCATCAGAAGAGGC
ATTCTAGTGACTGAAAGGGTGACCCTGTGTGTCCACATCATACCCTGGCTCCATCCTAAC
CCAGTGGATGAGCCTGAGGCCTCTAGCTGGCCGTTGCTCCCCTCCTTCTTTTTGCCTCTG
TTTTTCCATCTGTAAGATGGGGCTCCCTTTCCCTGTGCTCTGTCTTTGAGTTACTGGATG
GAAGTAACCTTGTAAATGCAAAACTCTTCTTCATGCAGGTCCTGCCCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-501, gnl|bosTau2|chr19 (8986194-8985677)
               

               
               1-501, gnl|Hg17|chr17 (30452099-30451568)
               

               
               1-501, gnl|Mm7|chr11 (82960529-82960031)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-501, gnl|bosTau2|chr19 (8986194-8985677)
               

               
               1-501, gnl|Hg17|chr17 (30452099-30451568)
               

               
               1-501, gnl|Mm7|chr11 (82960529-82960031)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cov (0.132153)
               

               
               cly (0.120642)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)
               

               
               cly (0.120642)
               

               
               cty (0.10408)

	1-501, gnl\|bosTau2\|chr19 (8986194-8985677)
	1-501, gnl\|Hg17\|chr17 (30452099-30451568)
	1-501, gnl\|Mm7\|chr11 (82960529-82960031)