Ss1.1-Pig4-TMW8036K05.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTAATTCTAATGGCCACAAAACTAGCCAGACGCTTTCGCTGAATTTTAACACAAATTCTT GTACTACAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTGGAAGACACAATAC GTCTTGCTGAACTAGTCATTGAAGTTCTTCAACAGAATGAGGAACACCATGCAGAGGCCT TCGCGTGGTGGTCAGATTTGATGGTGGAACATGCAGAGACGTTCCTGTCACTCTTTGCAG TGGACATGGATGCAGCGTTAGAGGTGCAGCCCCCAGACACATGGGACAGTTTTCCACTGT TTCAGCTCCTGAATGATTTTCTGCGGACCGATCATAATTTGTGCAATGGAAAATTTCACA AACACCTGCAAGACCTGTTTGCCCCACTTGTGGTTAGATATGTGGATTTGATGGAGTCCT CAATTGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAATAATG GATCAGGCACTTCAGAGGATCTGTTCTGGAAACTTGATGCCCTTCAGAAAGTACCAAATC TACCAGTTAACATCCCTCTAGGCATCCCACAAATGCCTACTTTTTCGGCACCGTCATGGA TGGCTGCTATATATGATGCTGATAATGGATCAGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTAATTCTAATGGCCACAAAACTAGCCAGACGCTTTCGCTGAATTTTAACACAAATTCTT GTACTACAGAAAATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTGGAAGACACAATAC GTCTTGCTGAACTAGTCATTGAAGTTCTTCAACAGAATGAGGAACACCATGCAGAGGCCT TCGCGTGGTGGTCAGATTTGATGGTGGAACATGCAGAGACGTTCCTGTCACTCTTTGCAG TGGACATGGATGCAGCGTTAGAGGTGCAGCCCCCAGACACATGGGACAGTTTTCCACTGT TTCAGCTCCTGAATGATTTTCTGCGGACCGATCATAATTTGTGCAATGGAAAATTTCACA AACACCTGCAAGACCTGTTTGCCCCACTTGTGGTTAGATATGTGGATTTGATGGAGTCCT CAATTGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCAATAATG GATCAGGCACTTCAGAGGATCTGTTCTGGAAACTTGATGCCCTTCAGAAAGTACCAAATC TACCAGTTAACATCCCTCTAGGCATCCCACAAATGCCTACTTTTTCGGCACCGTCATGGA TGGCTGCTATATATGATGCTGATAATGGATCAGGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-177, gnl|bosTau2|chr22 (30344429-30344253) | |
| 1-177, gnl|canFam2|chr20 (31574710-31574581) | |
| 1-177, gnl|danRer3|chr6 (23337840-23337718) | |
| 1-177, gnl|dasNov1|scaffold_51 (150217-150346) | |
| 1-177, gnl|echTel1|scaffold_314822 (78566-78695) | |
| 1-177, gnl|fr1|chrUn (223576466-223576340) | |
| 1-177, gnl|galGal2|chr12 (13169839-13169968) | |
| 1-177, gnl|hg17|chr3 (62459870-62459999) | |
| 1-177, gnl|Hg17|chr3 (62460052-62459876) | |
| 1-177, gnl|loxAfr1|scaffold_924 (91269-91140) | |
| 1-177, gnl|mm7|chr14 (10289263-10289392) | |
| 1-177, gnl|Mm7|chr14 (10289445-10289269) | |
| 1-177, gnl|monDom2|scaffold_5 (8109978-8110107) | |
| 1-177, gnl|oryCun1|scaffold_203520 (48771-48642) | |
| 1-177, gnl|panTro1|chr2 (64242458-64242587) | |
| 1-177, gnl|rheMac2|chr2 (73888296-73888167) | |
| 1-177, gnl|rn3|chr15 (14215095-14214966) | |
| 1-177, gnl|tetNig1|chr11 (5082030-5082156) | |
| 1-177, gnl|xenTro1|scaffold_703 (485867-485741) | |
| 334-482, gnl|bosTau2|chr22 (30337445-30337297) | |
| 334-482, gnl|Hg17|chr3 (62452195-62452047) | |
| 334-482, gnl|Mm7|chr14 (10281861-10281713) | |
| 521-622, gnl|bosTau2|chr22 (30329470-30329369) | |
| 521-622, gnl|Hg17|chr3 (62442539-62442438) | |
| 521-622, gnl|Mm7|chr14 (10273645-10273544) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-177, gnl|bosTau2|chr22 (30344429-30344253) | |
| 1-177, gnl|canFam2|chr20 (31574710-31574581) | |
| 1-177, gnl|danRer3|chr6 (23337840-23337718) | |
| 1-177, gnl|dasNov1|scaffold_51 (150217-150346) | |
| 1-177, gnl|echTel1|scaffold_314822 (78566-78695) | |
| 1-177, gnl|fr1|chrUn (223576466-223576340) | |
| 1-177, gnl|galGal2|chr12 (13169839-13169968) | |
| 1-177, gnl|hg17|chr3 (62459870-62459999) | |
| 1-177, gnl|Hg17|chr3 (62460052-62459876) | |
| 1-177, gnl|loxAfr1|scaffold_924 (91269-91140) | |
| 1-177, gnl|mm7|chr14 (10289263-10289392) | |
| 1-177, gnl|Mm7|chr14 (10289445-10289269) | |
| 1-177, gnl|monDom2|scaffold_5 (8109978-8110107) | |
| 1-177, gnl|oryCun1|scaffold_203520 (48771-48642) | |
| 1-177, gnl|panTro1|chr2 (64242458-64242587) | |
| 1-177, gnl|rheMac2|chr2 (73888296-73888167) | |
| 1-177, gnl|rn3|chr15 (14215095-14214966) | |
| 1-177, gnl|tetNig1|chr11 (5082030-5082156) | |
| 1-177, gnl|xenTro1|scaffold_703 (485867-485741) | |
| 334-482, gnl|bosTau2|chr22 (30337445-30337297) | |
| 334-482, gnl|Hg17|chr3 (62452195-62452047) | |
| 334-482, gnl|Mm7|chr14 (10281861-10281713) | |
| 521-622, gnl|bosTau2|chr22 (30329470-30329369) | |
| 521-622, gnl|Hg17|chr3 (62442539-62442438) | |
| 521-622, gnl|Mm7|chr14 (10273645-10273544) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| fhi (0.169578) | |
| jej (0.0989218) |