Ss1.1-Pig4-TMW8036K14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACGGCGTGCTGTGCCGGACGCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTG AGCACCGACTACGCCCTGCGCACGGGGGCCTTTGAGCCAGCGGAGGCCTCCGTCAACGCC CAAGACCTCCGAGGGTCCTTGCAGGAGTTAAAGGAGAGGGCCCTGAGCCGCTACAACCTC GTGCGAGGCCGGGGCCCGGAGAGGCTGGTGTCTGGCTCAGACGACTTCACCCTGTTCCTG TGGTCCCCGGCGGAGGACAAGAAGCCCCTGGCACGGATGACGGGGCACCAGGCCCTCATC AACCAGGTGCTCTTCTCCCCAGATTCCCGCATCATCGCCAGCGCCTCCTTTGACAAGTCC ATCAAGCTGTGGGATGGCAGGACGGGCAAGTACCTGGCTTCCCTGCGCGGCCATGTGGCC GCCGTATACCAGATCGCGTGGTCAGCCGACAGCCGGCTCCTGGTCAGTGGCAGCAGTGAC AGCACGTTGAAGGTGTGGGATGTGAAGGCCCAGAAGCTGGCCGCAGACCTGCCGGGCCAC GCGGATGAGGTGTATGCTGTCGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGCGGTGGG AAGGACAAGTGCCTCCGGATATGGCGGAGATGAGAACTCCCAGGTTTTCTGGGCCCCCCA TCTGGACTCAGCCTCTGGCAGCTGCCTTCCCTGATGAAAACCAAAGACTTGGGGGTGGCC GCGGCCTGCGCTCCTGGGACAGACCCAGCGGGCTCTCCCCAGAGCAGGAGAGTGAAGGTT GCAGGAGCTTATCGCTGAGCTCGGCCACGGACACCACTTGGTGCCTCGCGGGTGCCGGCC AGGGTGGCGAGTGGCCAGGCCGTGACTAGCCCCTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACGGCGTGCTGTGCCGGACGCTGCAAGGCCACGGCCACTGGGTGAACACCATGGCCCTG AGCACCGACTACGCCCTGCGCACGGGGGCCTTTGAGCCAGCGGAGGCCTCCGTCAACGCC CAAGACCTCCGAGGGTCCTTGCAGGAGTTAAAGGAGAGGGCCCTGAGCCGCTACAACCTC GTGCGAGGCCGGGGCCCGGAGAGGCTGGTGTCTGGCTCAGACGACTTCACCCTGTTCCTG TGGTCCCCGGCGGAGGACAAGAAGCCCCTGGCACGGATGACGGGGCACCAGGCCCTCATC AACCAGGTGCTCTTCTCCCCAGATTCCCGCATCATCGCCAGCGCCTCCTTTGACAAGTCC ATCAAGCTGTGGGATGGCAGGACGGGCAAGTACCTGGCTTCCCTGCGCGGCCATGTGGCC GCCGTATACCAGATCGCGTGGTCAGCCGACAGCCGGCTCCTGGTCAGTGGCAGCAGTGAC AGCACGTTGAAGGTGTGGGATGTGAAGGCCCAGAAGCTGGCCGCAGACCTGCCGGGCCAC GCGGATGAGGTGTATGCTGTCGACTGGAGTCCAGATGGCCAGAGAGTGGCAAGCGGTGGG AAGGACAAGTGCCTCCGGATATGGCGGAGATGAGAACTCCCAGGTTTTCTGGGCCCCCCA TCTGGACTCAGCCTCTGGCAGCTGCCTTCCCTGATGAAAACCAAAGACTTGGGGGTGGCC GCGGCCTGCGCTCCTGGGACAGACCCAGCGGGCTCTCCCCAGAGCAGGAGAGTGAAGGTT GCAGGAGCTTATCGCTGAGCTCGGCCACGGACACCACTTGGTGCCTCGCGGGTGCCGGCC AGGGTGGCGAGTGGCCAGGCCGTGACTAGCCCCTTG |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 4-156, gnl|bosTau2|chr19 (9015659-9015506) | |
| 4-156, gnl|Hg17|chr17 (30487629-30487476) | |
| 4-156, gnl|Mm7|chr11 (82985950-82985797) | |
| 187-391, gnl|bosTau2|chr19 (9014609-9014405) | |
| 187-391, gnl|canFam2|chr9 (41550318-41550094) | |
| 187-391, gnl|dasNov1|scaffold_48550 (8580-8810) | |
| 187-391, gnl|echTel1|scaffold_235022 (12054-11831) | |
| 187-391, gnl|fr1|chrUn (220179155-220178934) | |
| 187-391, gnl|galGal2|chr19 (6367470-6367246) | |
| 187-391, gnl|hg17|chr17 (30486376-30486600) | |
| 187-391, gnl|Hg17|chr17 (30486583-30486379) | |
| 187-391, gnl|loxAfr1|scaffold_618 (119164-119387) | |
| 187-391, gnl|mm7|chr11 (82984565-82984785) | |
| 187-391, gnl|Mm7|chr11 (82984772-82984568) | |
| 187-391, gnl|monDom2|scaffold_44 (7534743-7534520) | |
| 187-391, gnl|oryCun1|scaffold_206206 (66773-66996) | |
| 187-391, gnl|panTro1|chr19 (34008287-34008511) | |
| 187-391, gnl|rheMac2|chr16 (30435625-30435849) | |
| 187-391, gnl|rn3|chr10 (71133250-71133470) | |
| 187-391, gnl|tetNig1|chr7 (3592185-3591971) | |
| 187-391, gnl|xenTro1|scaffold_38 (1293031-1293253) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-156, gnl|bosTau2|chr19 (9015659-9015506) | |
| 4-156, gnl|Hg17|chr17 (30487629-30487476) | |
| 4-156, gnl|Mm7|chr11 (82985950-82985797) | |
| 187-391, gnl|bosTau2|chr19 (9014609-9014405) | |
| 187-391, gnl|canFam2|chr9 (41550318-41550094) | |
| 187-391, gnl|dasNov1|scaffold_48550 (8580-8810) | |
| 187-391, gnl|echTel1|scaffold_235022 (12054-11831) | |
| 187-391, gnl|fr1|chrUn (220179155-220178934) | |
| 187-391, gnl|galGal2|chr19 (6367470-6367246) | |
| 187-391, gnl|hg17|chr17 (30486376-30486600) | |
| 187-391, gnl|Hg17|chr17 (30486583-30486379) | |
| 187-391, gnl|loxAfr1|scaffold_618 (119164-119387) | |
| 187-391, gnl|mm7|chr11 (82984565-82984785) | |
| 187-391, gnl|Mm7|chr11 (82984772-82984568) | |
| 187-391, gnl|monDom2|scaffold_44 (7534743-7534520) | |
| 187-391, gnl|oryCun1|scaffold_206206 (66773-66996) | |
| 187-391, gnl|panTro1|chr19 (34008287-34008511) | |
| 187-391, gnl|rheMac2|chr16 (30435625-30435849) | |
| 187-391, gnl|rn3|chr10 (71133250-71133470) | |
| 187-391, gnl|tetNig1|chr7 (3592185-3591971) | |
| 187-391, gnl|xenTro1|scaffold_38 (1293031-1293253) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| eru (0.120048) | |
| eje (0.0988338) |