Non-Coding RNA Search

Ss1.1-Pig4-TMW8036M20.5

Sequence:


               
               TGCGCACACTTAATGAAATGGAGCTTGAGCTTTCTGATGTGCCCCCAGGCAACATGTTTG
TTTAGGATAAGTATTCTCTGTTTTTTNTGCTCTGTGAACATTTTCAGCTGTGAGTTAGCA
TACAGCATATACTCATTGGTTTAATTATCATCAGTTGTGTTTGGGTGGCTTGGAATGCAT
AACTCCAACTTTTTTAGAGTTGGTAGGATCAGGACTCCGTGGTTTACTTTGTGTTTTTAA
AGTATTAAAGAAAGTGTTGTTAATTTGCAATCAAGGAGAGAAATGACAAGGTAGAAGGAT
TCCTTTCTTTTGTCTTATGAGGTGTAATTTGTTATTTTGCTTTCTCACAACTGACTGATG
TATGGTTTCCTTCTTGACTTTTCAGATCAGAGGCAAGAAAAACTCTTCAAAAAGTTTTTA
GTGGGAATGCATAGACCATTTTATCAGTTATTTGCAATGAAATCACCATTTAACCTATGG
CATTCTTCAAAACTTGTTTGATTTCTTATTGTGCCACTAAGGTATTTACGCAATATTTGA
GATAAGGAAGTGAGGGTGTGAATAACCTATGCTTCCTCCTTCAGTTCTCTTGATCCCTCC
TGTCAGCTTCCCCCATTCCTTCCTGCAGCAGCCTATTTCCAATTTTAATTTACGTGGGAT
TTTCTGTAAGCCATTAAGAAATATGTATGACACATCAGAAAGGCTGGCTGTGTAGTCCTC
TATAATAGCATGTTAACATTCGCTTCTTAATTCTGAGAGACAAAAATTATCCTCTCCTAT
CTTCGATTTTTCAACAGGCTAGTCCCATCCCACGATTCTTTGGTAGGTAGCTCAAGACGT
TTCCCTATTTTAGCATAATATACTATATGCTGCAAAAAAAAAAAAAATCACTTTTATATT
TTTTTGCCAAGATATGTTTTTAAAATTTGAGTTATTAGTTCTGTTTCATAGATTTCATCA
GGCCTCTTTTGTTAACCTAGTCCATTGATTAGAGAGTCTGGTTAGTTACTAGATGTTATG
ATTTACCTCTGGTCACATAAGGAAGAAGAGGCAAAGGCAAGATTGGCAGTTTATTGGATT
GTGATGATCATTGTACAACTACAGGTGTGATAAATTCATTGAGTAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGCACACTTAATGAAATGGAGCTTGAGCTTTCTGATGTGCCCCCAGGCAACATGTTTG
TTTAGGATAAGTATTCTCTGTTTTTTNTGCTCTGTGAACATTTTCAGCTGTGAGTTAGCA
TACAGCATATACTCATTGGTTTAATTATCATCAGTTGTGTTTGGGTGGCTTGGAATGCAT
AACTCCAACTTTTTTAGAGTTGGTAGGATCAGGACTCCGTGGTTTACTTTGTGTTTTTAA
AGTATTAAAGAAAGTGTTGTTAATTTGCAATCAAGGAGAGAAATGACAAGGTAGAAGGAT
TCCTTTCTTTTGTCTTATGAGGTGTAATTTGTTATTTTGCTTTCTCACAACTGACTGATG
TATGGTTTCCTTCTTGACTTTTCAGATCAGAGGCAAGAAAAACTCTTCAAAAAGTTTTTA
GTGGGAATGCATAGACCATTTTATCAGTTATTTGCAATGAAATCACCATTTAACCTATGG
CATTCTTCAAAACTTGTTTGATTTCTTATTGTGCCACTAAGGTATTTACGCAATATTTGA
GATAAGGAAGTGAGGGTGTGAATAACCTATGCTTCCTCCTTCAGTTCTCTTGATCCCTCC
TGTCAGCTTCCCCCATTCCTTCCTGCAGCAGCCTATTTCCAATTTTAATTTACGTGGGAT
TTTCTGTAAGCCATTAAGAAATATGTATGACACATCAGAAAGGCTGGCTGTGTAGTCCTC
TATAATAGCATGTTAACATTCGCTTCTTAATTCTGAGAGACAAAAATTATCCTCTCCTAT
CTTCGATTTTTCAACAGGCTAGTCCCATCCCACGATTCTTTGGTAGGTAGCTCAAGACGT
TTCCCTATTTTAGCATAATATACTATATGCTGCAAAAAAAAAAAAAATCACTTTTATATT
TTTTTGCCAAGATATGTTTTTAAAATTTGAGTTATTAGTTCTGTTTCATAGATTTCATCA
GGCCTCTTTTGTTAACCTAGTCCATTGATTAGAGAGTCTGGTTAGTTACTAGATGTTATG
ATTTACCTCTGGTCACATAAGGAAGAAGAGGCAAAGGCAAGATTGGCAGTTTATTGGATT
GTGATGATCATTGTACAACTACAGGTGTGATAAATTCATTGAGTAATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               10-495, gnl|bosTau2|chr8 (47698307-47698784)
               

               
               10-495, gnl|Hg17|chr11 (117605433-117604613)
               

               
               10-495, gnl|Mm7|chr9 (45009483-45009975)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-495, gnl|bosTau2|chr8 (47698307-47698784)
               

               
               10-495, gnl|Hg17|chr11 (117605433-117604613)
               

               
               10-495, gnl|Mm7|chr9 (45009483-45009975)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               mga (0.160205)
               

               
               liv (0.146284)
               

               
               bla (0.124347)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               liv (0.146284)
               

               
               bla (0.124347)

	10-495, gnl\|bosTau2\|chr8 (47698307-47698784)
	10-495, gnl\|Hg17\|chr11 (117605433-117604613)
	10-495, gnl\|Mm7\|chr9 (45009483-45009975)