Non-Coding RNA Search

Ss1.1-Pig4-TMW8036N12.5

Sequence:


               
               TCGAAAAGGGCAGTGTGTGCAGAAAGGTGACATTTGGACTAGGCCACCCTTTGAGTCGGT
GCTGAGGGCAGAGGGAGGGGGGCTTCCTCATTTCTTGCCAGCTTGCTGGCCTGTTGATTT
TTCCCACCCCCACTGACCTTTGAGGCAGAGACACAGCACGATGAGTCATGTGTAAGCTCA
TGAGCAAACCAAGGCTGGGTGTTTGTCAACAGAAAGCAGAACCTCCCCCTCCTCCAGGGA
TGCTCTGTAGATTGGTTGGCGGTCAGCCTGTATGCTGTCCCACCAAACATGTATATCGGA
GGATCTGGAAGCAGCTTGGATGGAGAAGACACTTTTCCGGACGGACGCTGCACACCCTGA
TTAGTTCTCTGTGAACTGGGTCAATCTTCCCTCTTCCTTCTTGTGTTATGGGAACAAATT
ATACAGATCAAGAGTGGAGGTTTGATTTTTTTTCGGAGATGATCCCATGTACAGAGTCTC
CTAAAGCAAACTGGATTTGTAGGCAATTCACCACCACCAGTGTTTAGATCATTTAGAAGT
GCATTTAAAAGAAAAGGAGAGTCTTATAAACACAGCTGAATAATTACTCAATTTAAGGAA
TAAATTAATATTCTAAATTCATATAGTATACGTGCAATTAAAATAAAATCCAAGGACAAG
TTTCTTCTTTTTTCTTTTTAGGGCTGCAACCGTGGCTGGGAATCTCCATATGCCGCGGGA
GCGGCCCAAGAAATAGCAACAATAACAACAACAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGAAAAGGGCAGTGTGTGCAGAAAGGTGACATTTGGACTAGGCCACCCTTTGAGTCGGT
GCTGAGGGCAGAGGGAGGGGGGCTTCCTCATTTCTTGCCAGCTTGCTGGCCTGTTGATTT
TTCCCACCCCCACTGACCTTTGAGGCAGAGACACAGCACGATGAGTCATGTGTAAGCTCA
TGAGCAAACCAAGGCTGGGTGTTTGTCAACAGAAAGCAGAACCTCCCCCTCCTCCAGGGA
TGCTCTGTAGATTGGTTGGCGGTCAGCCTGTATGCTGTCCCACCAAACATGTATATCGGA
GGATCTGGAAGCAGCTTGGATGGAGAAGACACTTTTCCGGACGGACGCTGCACACCCTGA
TTAGTTCTCTGTGAACTGGGTCAATCTTCCCTCTTCCTTCTTGTGTTATGGGAACAAATT
ATACAGATCAAGAGTGGAGGTTTGATTTTTTTTCGGAGATGATCCCATGTACAGAGTCTC
CTAAAGCAAACTGGATTTGTAGGCAATTCACCACCACCAGTGTTTAGATCATTTAGAAGT
GCATTTAAAAGAAAAGGAGAGTCTTATAAACACAGCTGAATAATTACTCAATTTAAGGAA
TAAATTAATATTCTAAATTCATATAGTATACGTGCAATTAAAATAAAATCCAAGGACAAG
TTTCTTCTTTTTTCTTTTTAGGGCTGCAACCGTGGCTGGGAATCTCCATATGCCGCGGGA
GCGGCCCAAGAAATAGCAACAATAACAACAACAACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-671, gnl|bosTau2|chr6 (29835683-29836350)
               

               
               5-671, gnl|Hg17|chr4 (37472665-37471963)
               

               
               5-671, gnl|Mm7|chr5 (63291013-63290343)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-671, gnl|bosTau2|chr6 (29835683-29836350)
               

               
               5-671, gnl|Hg17|chr4 (37472665-37471963)
               

               
               5-671, gnl|Mm7|chr5 (63291013-63290343)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	5-671, gnl\|bosTau2\|chr6 (29835683-29836350)
	5-671, gnl\|Hg17\|chr4 (37472665-37471963)
	5-671, gnl\|Mm7\|chr5 (63291013-63290343)