Non-Coding RNA Search

Ss1.1-Pig4-TMW8037B14.3

Sequence:


               
               GTGCCATGGGGTGGCCAGAAAAAAGAAAAAAGAAAGGAATGATTGATAGGAAGAAATTTT
AGTATTTATACTATTTAGAAGAAGTAGTCAATAATTTTTGTGAAACAAATAGTGTCTCAT
CAAAGCACTAGCTAAAAGATTCAAACTTACTGCCATTTGGGGGAAAATATTTTTCCTGGT
TAAAATGATTTTTTTTGTCAGGATATTGAGATGTTAGCTGACTTCAATGACTATAAAAAG
CCACCTGAAATTCTTTTTTGGAAATAAATAGGTATAAGCCCGCAGGTCAATAAACTGTAT
CTCAGTCAGTCAGTAAAAAACATAGCAAGATGTTTTCTGAGCCAGAGTCTTCTCCGCTTT
TATCACTTCTTGTCTAGTTGACATTAACAGAATAATTAGGGGAACTTTTATTCCCTGATA
CTTGTGTTGAAGGACGCAGTCATCAGTGCTGGCTGGAACCTTAAAAATCTGCACGGAGTT
CCTTCAGATGATTGTAATTTATTTTTGCCATAATTCCAAGAATAACAAGCAGCTGTGACC
CATTTTATCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCATGGGGTGGCCAGAAAAAAGAAAAAAGAAAGGAATGATTGATAGGAAGAAATTTT
AGTATTTATACTATTTAGAAGAAGTAGTCAATAATTTTTGTGAAACAAATAGTGTCTCAT
CAAAGCACTAGCTAAAAGATTCAAACTTACTGCCATTTGGGGGAAAATATTTTTCCTGGT
TAAAATGATTTTTTTTGTCAGGATATTGAGATGTTAGCTGACTTCAATGACTATAAAAAG
CCACCTGAAATTCTTTTTTGGAAATAAATAGGTATAAGCCCGCAGGTCAATAAACTGTAT
CTCAGTCAGTCAGTAAAAAACATAGCAAGATGTTTTCTGAGCCAGAGTCTTCTCCGCTTT
TATCACTTCTTGTCTAGTTGACATTAACAGAATAATTAGGGGAACTTTTATTCCCTGATA
CTTGTGTTGAAGGACGCAGTCATCAGTGCTGGCTGGAACCTTAAAAATCTGCACGGAGTT
CCTTCAGATGATTGTAATTTATTTTTGCCATAATTCCAAGAATAACAAGCAGCTGTGACC
CATTTTATCTGT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               33-430, gnl|bosTau2|chr11 (4370234-4369819)
               

               
               33-430, gnl|Hg17|chr2 (100651902-100652646)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-430, gnl|bosTau2|chr11 (4370234-4369819)
               

               
               33-430, gnl|Hg17|chr2 (100651902-100652646)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               isp (0.451128)
               

               
               fbs (0.175346)
               

               
               rec (0.17307)
               

               
               lyg (0.133103)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.451128)
               

               
               fbs (0.175346)
               

               
               rec (0.17307)
               

               
               lyg (0.133103)
               

               
               spc (0.113366)

	33-430, gnl\|bosTau2\|chr11 (4370234-4369819)
	33-430, gnl\|Hg17\|chr2 (100651902-100652646)

	isp (0.451128)
	fbs (0.175346)
	rec (0.17307)
	lyg (0.133103)
	spc (0.113366)