Non-Coding RNA Search

Ss1.1-Pig4-TMW8037H05.3

Sequence:


               
               GTTCTAGATCGCGACTGGAGTTTTTTTTTTTTTTTTTTTAAGAAACATCTTTTTATTTTG
AATGATAGTACAAAAACTGTATATATAATATAGATCTGTATAGGTATACATACACACAAA
TGCTCACATACACACACACATTCTCATCAAAATCAAAACCTATTTTATTAAAATCCTAAA
TAAAAAAGGAAGTATATTTAACTTTTCCTAAAACATACTGTACATAAAGCTGTTAGACAA
CCTGAAAAACTGAAGATGTTTTAAGAATCTAAGTACCCCATCTTCCCTTTCTCTGCTCCC
TCCAACACAAATGGCCTTGGCAGAAGGACAGTACATAGGGCAAAGCCAGAAAAGGGAGCT
GCTATCATTAATGTTGATAGAGCAAAATCCCTGAAACCAACTAGGAAGCATAGGACCTAG
ATTAATTCTCAGAAACAAAACCACTTAAGAATAAACAGAAAATATATGGTAGGGAAGGTG
GGGAGTAGAAAGGAAAGATTAAAAATGACCTACTAATTAAGTTCTAGTGCCTGGGAAAGA
CTCAATGAGATAAAAACAATGGGGTCAACCTAAGCAGAAGTAGTTAGAAAAGAGGAGGAC
AGAGATAGGCAATCAGAATTTCCTGCCATTAACAAGCCAAATTGCTACGTAGAGTCTAGA
GTCTAGGGATATCTCCACTCCTTAATTTTAGAGAGCCTTTAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTAGATCGCGACTGGAGTTTTTTTTTTTTTTTTTTTAAGAAACATCTTTTTATTTTG
AATGATAGTACAAAAACTGTATATATAATATAGATCTGTATAGGTATACATACACACAAA
TGCTCACATACACACACACATTCTCATCAAAATCAAAACCTATTTTATTAAAATCCTAAA
TAAAAAAGGAAGTATATTTAACTTTTCCTAAAACATACTGTACATAAAGCTGTTAGACAA
CCTGAAAAACTGAAGATGTTTTAAGAATCTAAGTACCCCATCTTCCCTTTCTCTGCTCCC
TCCAACACAAATGGCCTTGGCAGAAGGACAGTACATAGGGCAAAGCCAGAAAAGGGAGCT
GCTATCATTAATGTTGATAGAGCAAAATCCCTGAAACCAACTAGGAAGCATAGGACCTAG
ATTAATTCTCAGAAACAAAACCACTTAAGAATAAACAGAAAATATATGGTAGGGAAGGTG
GGGAGTAGAAAGGAAAGATTAAAAATGACCTACTAATTAAGTTCTAGTGCCTGGGAAAGA
CTCAATGAGATAAAAACAATGGGGTCAACCTAAGCAGAAGTAGTTAGAAAAGAGGAGGAC
AGAGATAGGCAATCAGAATTTCCTGCCATTAACAAGCCAAATTGCTACGTAGAGTCTAGA
GTCTAGGGATATCTCCACTCCTTAATTTTAGAGAGCCTTTAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               33-708, gnl|bosTau2|chr3 (16479773-16480467)
               

               
               33-708, gnl|Hg17|chr1 (147911079-147910396)
               

               
               33-708, gnl|Mm7|chr3 (95055715-95056355)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-708, gnl|bosTau2|chr3 (16479773-16480467)
               

               
               33-708, gnl|Hg17|chr1 (147911079-147910396)
               

               
               33-708, gnl|Mm7|chr3 (95055715-95056355)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	33-708, gnl\|bosTau2\|chr3 (16479773-16480467)
	33-708, gnl\|Hg17\|chr1 (147911079-147910396)
	33-708, gnl\|Mm7\|chr3 (95055715-95056355)