Ss1.1-Pig4-TMW8037H14.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTACTGGGATATAATGAACTCATCGGAAAAACACGATAAGATTCCTGAGATCTGGGAAGG CCACAACATAGCCGACTACATCGACCCCGACATCATGCAGAAACTGGAAGAGTTGGAGAA AGAAGAGGAGTTACGAGCCGCTGCCGGGGAGTATGACAGCGAGTCTGACAGTGAGGACGA GGAAATGGCGGAGATCCGCCAGCTGGCGAAGCAGATCAGGGAAAAAAAGAAGTTGAAGAT TCTCCAGTCCAGAGAGAAGGATGCCGGGGGCCCCAGGATGCCCCGCACGGCCAAGAAGGT GCAGCGGAAGGTATTGGAGGACGAGATGCGCGCGCTCGGCGTGGACATGGACCACAAGGA CGACGCGCATTACGCAGTCCAGGCCAGACGGTCTCGCAGTGTCACTAGGAAGAGAAAGCG GGGAGACTCTGTCCCGCCCCCCGCTGCGGCCCGGAGCCGCAGCTGCTCTCGGACTCCCCG AGACGTCTCTGGGCTGCGGGATGTCAAGATGGTGAAGAAAGCCAAGAGCATGATGAAGAA GGCGCAGAAGACAATGAACCGCTCGGGGCGGAGGGGGGAGGCGGACAGACACGTGTTTGA CACGAAGCCCAAGCACTTGCTCTCAGGCAAGAGGAAAGCAGGCAAGAAGGACAGGAGGTA GTGGGCCCGCAGCTGGAGCGCTTTGGCGAAACCGCTTCCTGGTTTGGATTTGAAAAACTG GAGTCCGGGTCTGTAAACCGAGTGTAACAGTGAAACAGCCAAAGCACGCATCGCCTTGCG GAAGGCTGTGCTCACCTCCGGGCTGCACAGGCGTGGGGGGGGTTCGTCACTGCGTGATGA GGCGGGTCCTTTGAGTAGGCGGTGGCTTCTCATTGAGGGGGGTGCTGGTTGCTTCAGAAG CGCAGGGCTGGGAGGGTGTGTGGGTGTGACGTGTCTCCGACGGAGAAGGGTCTTCCTCTG GAGGAGCGGACGGGGGTTCACGGCTTGTGAGTCCTTTTTTGCAGGGAAAACCTCCGCGCC TGTGGGTGTGGGCAAAAGGCTTCCAGCCAGGCCTGCAGACACAAGAGCTGGGGACGCTTC TGAGTCAGAGGGCAGCACAGAGTCGTTCTCTGGTCTTGTGCGATGCTCCCGTGTAGTCTG TCTGCAACTATTTTTTCCCAAATAAACTTCCAAAAGAAAGCCAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTACTGGGATATAATGAACTCATCGGAAAAACACGATAAGATTCCTGAGATCTGGGAAGG CCACAACATAGCCGACTACATCGACCCCGACATCATGCAGAAACTGGAAGAGTTGGAGAA AGAAGAGGAGTTACGAGCCGCTGCCGGGGAGTATGACAGCGAGTCTGACAGTGAGGACGA GGAAATGGCGGAGATCCGCCAGCTGGCGAAGCAGATCAGGGAAAAAAAGAAGTTGAAGAT TCTCCAGTCCAGAGAGAAGGATGCCGGGGGCCCCAGGATGCCCCGCACGGCCAAGAAGGT GCAGCGGAAGGTATTGGAGGACGAGATGCGCGCGCTCGGCGTGGACATGGACCACAAGGA CGACGCGCATTACGCAGTCCAGGCCAGACGGTCTCGCAGTGTCACTAGGAAGAGAAAGCG GGGAGACTCTGTCCCGCCCCCCGCTGCGGCCCGGAGCCGCAGCTGCTCTCGGACTCCCCG AGACGTCTCTGGGCTGCGGGATGTCAAGATGGTGAAGAAAGCCAAGAGCATGATGAAGAA GGCGCAGAAGACAATGAACCGCTCGGGGCGGAGGGGGGAGGCGGACAGACACGTGTTTGA CACGAAGCCCAAGCACTTGCTCTCAGGCAAGAGGAAAGCAGGCAAGAAGGACAGGAGGTA GTGGGCCCGCAGCTGGAGCGCTTTGGCGAAACCGCTTCCTGGTTTGGATTTGAAAAACTG GAGTCCGGGTCTGTAAACCGAGTGTAACAGTGAAACAGCCAAAGCACGCATCGCCTTGCG GAAGGCTGTGCTCACCTCCGGGCTGCACAGGCGTGGGGGGGGTTCGTCACTGCGTGATGA GGCGGGTCCTTTGAGTAGGCGGTGGCTTCTCATTGAGGGGGGTGCTGGTTGCTTCAGAAG CGCAGGGCTGGGAGGGTGTGTGGGTGTGACGTGTCTCCGACGGAGAAGGGTCTTCCTCTG GAGGAGCGGACGGGGGTTCACGGCTTGTGAGTCCTTTTTTGCAGGGAAAACCTCCGCGCC TGTGGGTGTGGGCAAAAGGCTTCCAGCCAGGCCTGCAGACACAAGAGCTGGGGACGCTTC TGAGTCAGAGGGCAGCACAGAGTCGTTCTCTGGTCTTGTGCGATGCTCCCGTGTAGTCTG TCTGCAACTATTTTTTCCCAAATAAACTTCCAAAAGAAAGCCAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 99-299, gnl|bosTau2|chr13 (31355875-31355675) | |
| 99-299, gnl|canFam2|chr2 (36790895-36790684) | |
| 99-299, gnl|danRer3|chr2 (37326542-37326329) | |
| 99-299, gnl|dasNov1|scaffold_88266 (3443-3654) | |
| 99-299, gnl|fr1|chrUn (287283170-287282960) | |
| 99-299, gnl|galGal2|chr2 (9790945-9791156) | |
| 99-299, gnl|hg17|chr10 (1048398-1048609) | |
| 99-299, gnl|Hg17|chr10 (1048404-1048603) | |
| 99-299, gnl|loxAfr1|scaffold_33323 (15778-15991) | |
| 99-299, gnl|mm7|chr13 (8890272-8890061) | |
| 99-299, gnl|Mm7|chr13 (8890264-8890065) | |
| 99-299, gnl|monDom2|scaffold_7 (24467586-24467797) | |
| 99-299, gnl|oryCun1|scaffold_176684 (107234-107445) | |
| 99-299, gnl|panTro1|chr8 (1113071-1113282) | |
| 99-299, gnl|rheMac2|chr9 (1198161-1198372) | |
| 99-299, gnl|rn3|chr17 (72126463-72126674) | |
| 99-299, gnl|tetNig1|chr15 (619811-619601) | |
| 99-299, gnl|xenTro1|scaffold_378 (590599-590388) | |
| 507-1180, gnl|bosTau2|chr13 (31352564-31351896) | |
| 507-1180, gnl|Hg17|chr10 (1053013-1053630) | |
| 507-1180, gnl|Mm7|chr13 (8886106-8885458) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 99-299, gnl|bosTau2|chr13 (31355875-31355675) | |
| 99-299, gnl|canFam2|chr2 (36790895-36790684) | |
| 99-299, gnl|danRer3|chr2 (37326542-37326329) | |
| 99-299, gnl|dasNov1|scaffold_88266 (3443-3654) | |
| 99-299, gnl|fr1|chrUn (287283170-287282960) | |
| 99-299, gnl|galGal2|chr2 (9790945-9791156) | |
| 99-299, gnl|hg17|chr10 (1048398-1048609) | |
| 99-299, gnl|Hg17|chr10 (1048404-1048603) | |
| 99-299, gnl|loxAfr1|scaffold_33323 (15778-15991) | |
| 99-299, gnl|mm7|chr13 (8890272-8890061) | |
| 99-299, gnl|Mm7|chr13 (8890264-8890065) | |
| 99-299, gnl|monDom2|scaffold_7 (24467586-24467797) | |
| 99-299, gnl|oryCun1|scaffold_176684 (107234-107445) | |
| 99-299, gnl|panTro1|chr8 (1113071-1113282) | |
| 99-299, gnl|rheMac2|chr9 (1198161-1198372) | |
| 99-299, gnl|rn3|chr17 (72126463-72126674) | |
| 99-299, gnl|tetNig1|chr15 (619811-619601) | |
| 99-299, gnl|xenTro1|scaffold_378 (590599-590388) | |
| 507-1180, gnl|bosTau2|chr13 (31352564-31351896) | |
| 507-1180, gnl|Hg17|chr10 (1053013-1053630) | |
| 507-1180, gnl|Mm7|chr13 (8886106-8885458) |
| Expressed library(ies): 9 entry(ies) | More info |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
| col (0.195008) | |
| nlu (0.191681) | |
| nje (0.16592) | |
| hlv (0.139256) | |
| che (0.136314) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| ebs (0.118301) | |
| ecc (0.115035) |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| nlu (0.191681) | |
| nje (0.16592) | |
| hlv (0.139256) | |
| che (0.136314) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| ebs (0.118301) | |
| ecc (0.115035) |