Non-Coding RNA Search

Ss1.1-Pig4-TMW8037H22.3

Sequence:


               
               TCGGGTTTACTCAACTTTGAGAAAGCATCAGCTGCTAACACACCTGAAAGAAGATCGTGT
CCTAAGACGTTGTGTGTGAAGATGATGTCTGCAAAAGACACAGTTAAAGTAATGGTTGTC
ATGCTTGCAATTTGTTTTCTTGCAAGATCAGATGGGAAGCCTATTAAGAAGAGATCTGTG
AGTGAAATACAGCTTATGCATAACCTGGGCAAACACCTGAGCTCTCTGGAGAGAGTGGAA
TGGCTGCGAAAGAAGCTGCAGGATGTGCACAACTTTGTTGCCCTCGGAGCTTCTATAGTT
CACAGAGATGGTGGTTCCCAGAGACCCCGAAAAAAGGAAGACAATGTCCTGGTTGAGAGC
CATCAAAAAAGTCTCGGAGAAGCAGATAAAGCTGCTGTGGATGTATTAATTAAAGCTAAA
CCCCAGTGAAAACACATATGATCAGAGAGCACTGCTCTAGACAGCATAAGGCAAACAATA
TTTCATGCTGCTAATGTTTTCAATCTCTATTAAGATTAAGTGCCAATATTTCTAATATTA
CTAAACTTGATGGGTAATCATTGCTAGCCATGATTGCTGAAATTTTAATTGATCATTTTG
ATTCTACTTTTACTCATTTAAGAGCTTCTTTTAACAATTCTATTTCTATTGATTCTAAAT
AAATGAAGTATTTCTTCCTGGTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGGGTTTACTCAACTTTGAGAAAGCATCAGCTGCTAACACACCTGAAAGAAGATCGTGT
CCTAAGACGTTGTGTGTGAAGATGATGTCTGCAAAAGACACAGTTAAAGTAATGGTTGTC
ATGCTTGCAATTTGTTTTCTTGCAAGATCAGATGGGAAGCCTATTAAGAAGAGATCTGTG
AGTGAAATACAGCTTATGCATAACCTGGGCAAACACCTGAGCTCTCTGGAGAGAGTGGAA
TGGCTGCGAAAGAAGCTGCAGGATGTGCACAACTTTGTTGCCCTCGGAGCTTCTATAGTT
CACAGAGATGGTGGTTCCCAGAGACCCCGAAAAAAGGAAGACAATGTCCTGGTTGAGAGC
CATCAAAAAAGTCTCGGAGAAGCAGATAAAGCTGCTGTGGATGTATTAATTAAAGCTAAA
CCCCAGTGAAAACACATATGATCAGAGAGCACTGCTCTAGACAGCATAAGGCAAACAATA
TTTCATGCTGCTAATGTTTTCAATCTCTATTAAGATTAAGTGCCAATATTTCTAATATTA
CTAAACTTGATGGGTAATCATTGCTAGCCATGATTGCTGAAATTTTAATTGATCATTTTG
ATTCTACTTTTACTCATTTAAGAGCTTCTTTTAACAATTCTATTTCTATTGATTCTAAAT
AAATGAAGTATTTCTTCCTGGTTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47523856|ref|NP_999566.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47523856|ref|NP_999566.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               168-669, gnl|bosTau2|chr15 (25031362-25030885)
               

               
               168-669, gnl|Hg17|chr11 (13470789-13470193)
               

               
               168-669, gnl|Mm7|chr7 (109302106-109301682)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               168-669, gnl|bosTau2|chr15 (25031362-25030885)
               

               
               168-669, gnl|Hg17|chr11 (13470789-13470193)
               

               
               168-669, gnl|Mm7|chr7 (109302106-109301682)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               fty (0.17584)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               fty (0.17584)

	168-669, gnl\|bosTau2\|chr15 (25031362-25030885)
	168-669, gnl\|Hg17\|chr11 (13470789-13470193)
	168-669, gnl\|Mm7\|chr7 (109302106-109301682)