Ss1.1-Pig4-TMW8037K03.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGAGCTCAACTCGGCTCCGGCCCGGGTTTCCGCGCGCGTCCATGCTTCCGGCCGGCCCG TGCCTCGCGGTGATGGCGGCAAGGTACGCGCGGCCCGTGCGGGTGCTGGTGGACATGGAC GGCGTGCTGGCGGACTTCGAGGCCGGCCTGCTGCGGGGCTTCCAGCGAAACTTCCCCAGG GAGCCGTACGTGCCGCTGGAGGAGCGCCGCGGCTTCTTCGCCCGGGAGCAGTACCGAGCC CTGCGCCCCGACCTGGCGGACAAAGTGGCCAGTGTGTATGAAGCCCCAGGCTTCTTCCTA AACTTGGAGCCCATCCCTGGAGCCTTGGAAGCCATGCGGGAGATGAATGACATGCAGGAC ACTGAGGTCTTCATCTGCACCAGCCCGCTGCTCAAGTATGACCACTGCGTGCGCGAGAAG TACGGCTGGGTGGAGAAGCACCTGGGGCCCCAGTTTGTGGAGCGCATTATCTTGACGAGG GACAAGACCATGGTCTTGGGGGACCTGCTCATTGATGACAAGGACACCATTCAAGGCCAA GAGGAGACCCCAAGCTGGGAGCACATCTTGTTCACCTGCTGCCACAACCAGCACCTGGCC CTGCCCCCGACCAGGAGGCGGCTACTCTCCTGGAGTGACAACTGGAAGGAGATTATAGAC AGCAAGCGGGAAGTCCTGTGGCGGGGCCCGCCCGGCCTGGGTCTGCTGCATGCATGAGCC AAGGGGCAGTGGCAGTGGACAGGATCTGGAGGAAGGGGAGGCAGGCCAGCAGGGAACCCC GGCACGACTGGGTGCCAGGGCAGCATGGTGGCAGGGACCCCTCAGCACTGCCCTCTGGAA CCTCCCGGGGTAGCTGCATGGCCACCTAGTGGGAAATCAGGAACCTTTTAAATAAAGCAC TGCTCACTGCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGAGCTCAACTCGGCTCCGGCCCGGGTTTCCGCGCGCGTCCATGCTTCCGGCCGGCCCG TGCCTCGCGGTGATGGCGGCAAGGTACGCGCGGCCCGTGCGGGTGCTGGTGGACATGGAC GGCGTGCTGGCGGACTTCGAGGCCGGCCTGCTGCGGGGCTTCCAGCGAAACTTCCCCAGG GAGCCGTACGTGCCGCTGGAGGAGCGCCGCGGCTTCTTCGCCCGGGAGCAGTACCGAGCC CTGCGCCCCGACCTGGCGGACAAAGTGGCCAGTGTGTATGAAGCCCCAGGCTTCTTCCTA AACTTGGAGCCCATCCCTGGAGCCTTGGAAGCCATGCGGGAGATGAATGACATGCAGGAC ACTGAGGTCTTCATCTGCACCAGCCCGCTGCTCAAGTATGACCACTGCGTGCGCGAGAAG TACGGCTGGGTGGAGAAGCACCTGGGGCCCCAGTTTGTGGAGCGCATTATCTTGACGAGG GACAAGACCATGGTCTTGGGGGACCTGCTCATTGATGACAAGGACACCATTCAAGGCCAA GAGGAGACCCCAAGCTGGGAGCACATCTTGTTCACCTGCTGCCACAACCAGCACCTGGCC CTGCCCCCGACCAGGAGGCGGCTACTCTCCTGGAGTGACAACTGGAAGGAGATTATAGAC AGCAAGCGGGAAGTCCTGTGGCGGGGCCCGCCCGGCCTGGGTCTGCTGCATGCATGAGCC AAGGGGCAGTGGCAGTGGACAGGATCTGGAGGAAGGGGAGGCAGGCCAGCAGGGAACCCC GGCACGACTGGGTGCCAGGGCAGCATGGTGGCAGGGACCCCTCAGCACTGCCCTCTGGAA CCTCCCGGGGTAGCTGCATGGCCACCTAGTGGGAAATCAGGAACCTTTTAAATAAAGCAC TGCTCACTGCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 13-259, gnl|bosTau2|chr19 (50890166-50890408) | |
| 13-259, gnl|canFam2|chr2 (4364227-4364049) | |
| 13-259, gnl|hg17|chr14 (73107982-73108157) | |
| 13-259, gnl|Hg17|chr17 (70639452-70639223) | |
| 13-259, gnl|loxAfr1|scaffold_28164 (17673-17851) | |
| 13-259, gnl|mm7|chr11 (115600652-115600829) | |
| 13-259, gnl|Mm7|chr11 (115600866-115600651) | |
| 13-259, gnl|panTro1|chr15 (72872063-72872238) | |
| 13-259, gnl|rheMac2|chr7 (136677768-136677943) | |
| 13-259, gnl|rn3|chr10 (105591173-105591350) | |
| 534-718, gnl|bosTau2|chr19 (50891590-50891774) | |
| 534-718, gnl|canFam2|chr2 (4364712-4364523) | |
| 534-718, gnl|dasNov1|scaffold_2296 (263-446) | |
| 534-718, gnl|echTel1|scaffold_183674 (7619-7799) | |
| 534-718, gnl|hg17|chr14 (73107540-73107700) | |
| 534-718, gnl|Hg17|chr17 (70638334-70638151) | |
| 534-718, gnl|mm7|chr11 (115599585-115599745) | |
| 534-718, gnl|panTro1|chr15 (72871617-72871780) | |
| 534-718, gnl|rheMac2|chr7 (136677321-136677485) | |
| 534-718, gnl|rn3|chr10 (105589387-105589547) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-259, gnl|bosTau2|chr19 (50890166-50890408) | |
| 13-259, gnl|canFam2|chr2 (4364227-4364049) | |
| 13-259, gnl|hg17|chr14 (73107982-73108157) | |
| 13-259, gnl|Hg17|chr17 (70639452-70639223) | |
| 13-259, gnl|loxAfr1|scaffold_28164 (17673-17851) | |
| 13-259, gnl|mm7|chr11 (115600652-115600829) | |
| 13-259, gnl|Mm7|chr11 (115600866-115600651) | |
| 13-259, gnl|panTro1|chr15 (72872063-72872238) | |
| 13-259, gnl|rheMac2|chr7 (136677768-136677943) | |
| 13-259, gnl|rn3|chr10 (105591173-105591350) | |
| 534-718, gnl|bosTau2|chr19 (50891590-50891774) | |
| 534-718, gnl|canFam2|chr2 (4364712-4364523) | |
| 534-718, gnl|dasNov1|scaffold_2296 (263-446) | |
| 534-718, gnl|echTel1|scaffold_183674 (7619-7799) | |
| 534-718, gnl|hg17|chr14 (73107540-73107700) | |
| 534-718, gnl|Hg17|chr17 (70638334-70638151) | |
| 534-718, gnl|mm7|chr11 (115599585-115599745) | |
| 534-718, gnl|panTro1|chr15 (72871617-72871780) | |
| 534-718, gnl|rheMac2|chr7 (136677321-136677485) | |
| 534-718, gnl|rn3|chr10 (105589387-105589547) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| col (0.195008) | |
| ton (0.1755) | |
| hlv (0.139256) | |
| ute (0.132784) | |
| cly (0.120642) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| col (0.195008) | |
| ton (0.1755) | |
| hlv (0.139256) | |
| ute (0.132784) | |
| cly (0.120642) |