Ss1.1-Pig4-TMW8037N21.5
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GACAGATGGAGCCTCTTCCCTCACCTGAGGGCGTGATCTGGTCCCCTCCCGGTGGCCGAG
GAGTGGCTACTTTGGCCAAAGTTTGATTTTCCCAATACTTGTCCAAATTTGGATTAAAAC
ATTGAACTCTTAGTCGATAACTTTCTGTCTGTTTGGAGTTGTGACACCGGTGTCTCGAAG
AGACCTCACCGGACTTCAGAGGGGGATAGAAGCCTCGAGTGAGTGTGAGTGAGTGGCCGA
AGGAGACCTTCTGACGCGGGATGGCAACGGGAACGCGCTATGCCGGGAAGGTGGTAATCG
TGACGGGGGGCGGGCGCGGCATCGGAGCTGGGATCGTCCGAGCCTTCGTGGAAAGTGGCG
CCCAGGTGGTGATCTGTGACAAAGACGAGTCCACTGGTCGGACCCTGGAGCAGGAGCTGC
CTGGGTCTGTCTTTGTCCTCTGTGACGTGACTCAAGAGGATGATGTGAAGACCCTCGTTT
CTGAGACCATCCGCCGCTTCGGCCGCCTGGACTGTGTGGTCAACAACGCCGGCTCCCATC
CACCTCTGCAGTGGCCTGAGGAGACCTCCATCCAAGGCTTCCGGCAGCTGCTGGAGCTGA
ACCTGCTGGGGATGTACACGCTGACCAAGCTCGCCCTCCCTCACCTGCGCAAGAGCCGAG
GCAACGTCATCAACATCTCCAGCCTGGTCGGGGCGATCGGCCAGTCCCAGGCAGTTCCCT
ATGTGGCCACCAAGGGGGCGGTGACAGCCATGACCAAAGCCTTGGCCTTGGATGAGAGTC
AATATGGCGTCCGCGTCAACTGCATCTCCCCAGGAAACATCTGGACCCCGCTGTGGGAAG
AGCTGGCAGCATCAACACCTGACCCCAAGGCCAAAATCCGAGAGGGCACGCTGGCCCAGC
CCCTGGGCCGCATGGGCCAGCCTGCTGAGGTGGGGGCTGCTGCTGTGTTCCTGGCCTCCG
AAGCCAGCTTCTGCACCGGGATTGAGCTGCTAGTGACTGGGGGCGCGGAGCTGGGCTTTG
GGTGCAAGGCGGCGCAGTGCAGCGTCCCCGCAGGGGCGTCTGTGATCCCCTAATCTCCCA
CATTTCCACCTGGGCCTCCCGGACCAGGGCTCTCCCATCGCAAACTCAGTCTCCCAAATT
CCCCTTCCCACCTCTCAGCTGCTGCGCCCCCCCGCCCCCCGCCAGACTTTAAGCCCACTT
ACCAATGTCCAGACCACCCCACATCTTTCCATAAAAGCACTTTGCAGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GACAGATGGAGCCTCTTCCCTCACCTGAGGGCGTGATCTGGTCCCCTCCCGGTGGCCGAG
GAGTGGCTACTTTGGCCAAAGTTTGATTTTCCCAATACTTGTCCAAATTTGGATTAAAAC
ATTGAACTCTTAGTCGATAACTTTCTGTCTGTTTGGAGTTGTGACACCGGTGTCTCGAAG
AGACCTCACCGGACTTCAGAGGGGGATAGAAGCCTCGAGTGAGTGTGAGTGAGTGGCCGA
AGGAGACCTTCTGACGCGGGATGGCAACGGGAACGCGCTATGCCGGGAAGGTGGTAATCG
TGACGGGGGGCGGGCGCGGCATCGGAGCTGGGATCGTCCGAGCCTTCGTGGAAAGTGGCG
CCCAGGTGGTGATCTGTGACAAAGACGAGTCCACTGGTCGGACCCTGGAGCAGGAGCTGC
CTGGGTCTGTCTTTGTCCTCTGTGACGTGACTCAAGAGGATGATGTGAAGACCCTCGTTT
CTGAGACCATCCGCCGCTTCGGCCGCCTGGACTGTGTGGTCAACAACGCCGGCTCCCATC
CACCTCTGCAGTGGCCTGAGGAGACCTCCATCCAAGGCTTCCGGCAGCTGCTGGAGCTGA
ACCTGCTGGGGATGTACACGCTGACCAAGCTCGCCCTCCCTCACCTGCGCAAGAGCCGAG
GCAACGTCATCAACATCTCCAGCCTGGTCGGGGCGATCGGCCAGTCCCAGGCAGTTCCCT
ATGTGGCCACCAAGGGGGCGGTGACAGCCATGACCAAAGCCTTGGCCTTGGATGAGAGTC
AATATGGCGTCCGCGTCAACTGCATCTCCCCAGGAAACATCTGGACCCCGCTGTGGGAAG
AGCTGGCAGCATCAACACCTGACCCCAAGGCCAAAATCCGAGAGGGCACGCTGGCCCAGC
CCCTGGGCCGCATGGGCCAGCCTGCTGAGGTGGGGGCTGCTGCTGTGTTCCTGGCCTCCG
AAGCCAGCTTCTGCACCGGGATTGAGCTGCTAGTGACTGGGGGCGCGGAGCTGGGCTTTG
GGTGCAAGGCGGCGCAGTGCAGCGTCCCCGCAGGGGCGTCTGTGATCCCCTAATCTCCCA
CATTTCCACCTGGGCCTCCCGGACCAGGGCTCTCCCATCGCAAACTCAGTCTCCCAAATT
CCCCTTCCCACCTCTCAGCTGCTGCGCCCCCCCGCCCCCCGCCAGACTTTAAGCCCACTT
ACCAATGTCCAGACCACCCCACATCTTTCCATAAAAGCACTTTGCAGC
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22-176, gnl|bosTau2|chr18 (48042474-48042319) |
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22-176, gnl|Hg17|chr19 (54032305-54032118) |
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22-176, gnl|Mm7|chr7 (41729822-41730004) |
| |
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183-358, gnl|bosTau2|chr18 (48041945-48041779) |
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183-358, gnl|Hg17|chr19 (54031546-54031383) |
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183-358, gnl|Mm7|chr7 (41730650-41730804) |
| |
|
625-735, gnl|bosTau2|chr18 (48022822-48022712) |
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625-735, gnl|canFam2|chr1 (110421986-110421864) |
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625-735, gnl|dasNov1|scaffold_253036 (1737-1865) |
|
625-735, gnl|echTel1|scaffold_221655 (4672-4556) |
|
625-735, gnl|fr1|chrUn (188783734-188783608) |
|
625-735, gnl|hg17|chr19 (54010097-54010225) |
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625-735, gnl|Hg17|chr19 (54010215-54010105) |
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625-735, gnl|loxAfr1|scaffold_29393 (1456-1583) |
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625-735, gnl|mm7|chr7 (41738758-41738630) |
|
625-735, gnl|Mm7|chr7 (41738638-41738748) |
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625-735, gnl|panTro1|chr20 (51397116-51397245) |
|
625-735, gnl|rn3|chr1 (96109982-96109854) |
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625-735, gnl|tetNig1|chrUn_random (78813573-78813699) |
| |
|
895-1140, gnl|bosTau2|chr15 (24921120-24921364) |
|
895-1140, gnl|Hg17|chr19 (54008422-54008175) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
22-176, gnl|bosTau2|chr18 (48042474-48042319) |
|
22-176, gnl|Hg17|chr19 (54032305-54032118) |
|
22-176, gnl|Mm7|chr7 (41729822-41730004) |
| |
|
183-358, gnl|bosTau2|chr18 (48041945-48041779) |
|
183-358, gnl|Hg17|chr19 (54031546-54031383) |
|
183-358, gnl|Mm7|chr7 (41730650-41730804) |
| |
|
625-735, gnl|bosTau2|chr18 (48022822-48022712) |
|
625-735, gnl|canFam2|chr1 (110421986-110421864) |
|
625-735, gnl|dasNov1|scaffold_253036 (1737-1865) |
|
625-735, gnl|echTel1|scaffold_221655 (4672-4556) |
|
625-735, gnl|fr1|chrUn (188783734-188783608) |
|
625-735, gnl|hg17|chr19 (54010097-54010225) |
|
625-735, gnl|Hg17|chr19 (54010215-54010105) |
|
625-735, gnl|loxAfr1|scaffold_29393 (1456-1583) |
|
625-735, gnl|mm7|chr7 (41738758-41738630) |
|
625-735, gnl|Mm7|chr7 (41738638-41738748) |
|
625-735, gnl|panTro1|chr20 (51397116-51397245) |
|
625-735, gnl|rn3|chr1 (96109982-96109854) |
|
625-735, gnl|tetNig1|chrUn_random (78813573-78813699) |
| |
|
895-1140, gnl|bosTau2|chr15 (24921120-24921364) |
|
895-1140, gnl|Hg17|chr19 (54008422-54008175) |
|
cga (0.558191) |
|
cli (0.458435) |
|
eje (0.296501) |
|
fty (0.17584) |
|
ill (0.175593) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
nco (0.161734) |
|
eli (0.151814) |
|
cag (0.151194) |
|
ute (0.132784) |
|
eep (0.122564) |
|
cly (0.120642) |
|
med (0.116252) |
|
cga (0.558191) |
|
cli (0.458435) |
|
eje (0.296501) |
|
fty (0.17584) |
|
ill (0.175593) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
nco (0.161734) |
|
eli (0.151814) |
|
cag (0.151194) |
|
ute (0.132784) |
|
eep (0.122564) |
|
cly (0.120642) |
|
med (0.116252) |
