Ss1.1-Pig4-TMW8037O09.5
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CCTATAACGTTGCCATGGATTACATTACGGTGGCACTCCTGATCTGGAATTTTGGTGTGG
TAGGAATGATTGCCATTCACTGGAAAGGCCCATTGCGACTCCAGCAGGCATATCTCATTA
TGATCAGTGCCCTCATGGCCCTGGTGTTTATCAAGTACCTCCCGGAATGGACCGCGTGGC
TCATCTTGGCTGTGATTTCAGTATACGATTTAGTGGCTGTTTTGTGTCCAAATGGCCCAC
TTCGTTTGCTGGTTGAAACAGCTCAGGAGAGAAATGAAACTCTCTTTCCAGCTCTTATTT
ACTCGTCAACAATGGTGTGGTTGGTGAATATGGCAGAAGGAGACCCAGAAGCCCAAAGGA
AGGTATCCAAAAACTCCAATTATAATGCACAAAGCACAGGTGAATCACAAGACTCTGTGA
CAGAGAGTGATGATGGTGGCTTCAGTGAAGAGTGGGAAGCCCAGAGGGACAGTCGCCTGG
GACCTCATCACTCTACAGCTGAGTCACGATCTGCTGTACAGGATCTTTCCAGAAGCATCC
CAGCCACTGAGGACCCAGAAGAAAGGGGAGTAAAACTTGGATTAGGAGATTTCATTTTCT
ACAGTGTTCTGGTTGGTAAAGCTTCTGCAACAGCCAGTGGAGACTGGAACACAACCATTG
CCTGTTTTGTAGCCATATTAATTGGTTTGTGCCTTACATTACTGCTCCTCGCCATTTTCA
AGAAAGCGTTGCCAGCTCTTCCAATCTCTATCACCTTTGGGCTTGTTTTCTACTTTGCCA
CAGATTATCTTGTGCAACCCTTTATGGACCAATTAGCATTCCATCAATTTTATATCTAGC
ATATTTCCAGTTAGAATCTCATGGATTTTTTCTCCTTTGGCTATAATAAAATCTGGGGAA
AGCAAAGGTGATTTTGCTGTGTCCACATCTAACAAAGTCAGGATTCCCAGCTGGACCTTT
TTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTGCACTTTTGGGCATTGGAAGGAGGTGT
CTACAGAGTGTGGTTTTGAACATATGTCATTGTGATGGACTGAGTCCCTCAGTGCAAAAA
CTACCAGATTTGAGGGACAAGGACAAGGACAAGTGATGGGCCAAAAAGTCGCTGTGCTCC
CACCAGCAGTTTGACCACTGGTCACAGGTGGATTTTACCAACGCTGCAGACTCTCAGGAC
TATCATTACCAAGAGCTTAAATGAAACGGTTTAAACCAAACAGGACTCTTCATCTTAAAC
TACATGGTGAAAGTCAACCTAATAAAACCTGTATTGAATTCTGAACCTTCTCGGGAGATC
CTATAAGGAGAGCAGGCACCAGCAGCAAAGTGGAAAGATGGAAAGGGGCTCAGACTTTCA
CTTTCAGACTTTCTTGCTGCAGACTTAACCATTTTTAAATAAGACTTTCTTCTTCCCCCT
GAGTCAAGTCAGATGTATAGGTTGATTTTGACAGTTCTTGTTCTCAAGCACTGAAACTCA
TTACCACCTATGGTGCCATTTCTTCGCAAGGCCAGTCTGAACTTACCTGAGGTTGCTTCT
TCTTTAAAAGTCTTGACCTCAGGTTCCAAATTCAGTAACTTCTGGAAATAATGGAACATA
ATGATTCTCTACCACCCGTAGGTAAATTCCAGGTTTCCCACCGAATTCCTAATTTGTAGG
CATACCTGTAGGTTCACTTGCCCCCATGTGCCTCTCTTGTTCCCTCTCTCTCCCTTCACT
CCCCTCCAAGGCACTTCTGTACAGTGAATATGGCAGCTCTGTTGTGGGAGCAGACGGTCC
AGTTATTCTAGGATTTTGCTCTTTGTGTGGTACAGAGAACGTGTCATGAATCAGTGCTCT
TGGCCTTGCTGTTGCCATTTCTTCAACAGCAAATACAATGTGTGCCCAAAGACAGTAGAA
TTAAAGAAGAGTAAAATGGCTGTT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCTATAACGTTGCCATGGATTACATTACGGTGGCACTCCTGATCTGGAATTTTGGTGTGG
TAGGAATGATTGCCATTCACTGGAAAGGCCCATTGCGACTCCAGCAGGCATATCTCATTA
TGATCAGTGCCCTCATGGCCCTGGTGTTTATCAAGTACCTCCCGGAATGGACCGCGTGGC
TCATCTTGGCTGTGATTTCAGTATACGATTTAGTGGCTGTTTTGTGTCCAAATGGCCCAC
TTCGTTTGCTGGTTGAAACAGCTCAGGAGAGAAATGAAACTCTCTTTCCAGCTCTTATTT
ACTCGTCAACAATGGTGTGGTTGGTGAATATGGCAGAAGGAGACCCAGAAGCCCAAAGGA
AGGTATCCAAAAACTCCAATTATAATGCACAAAGCACAGGTGAATCACAAGACTCTGTGA
CAGAGAGTGATGATGGTGGCTTCAGTGAAGAGTGGGAAGCCCAGAGGGACAGTCGCCTGG
GACCTCATCACTCTACAGCTGAGTCACGATCTGCTGTACAGGATCTTTCCAGAAGCATCC
CAGCCACTGAGGACCCAGAAGAAAGGGGAGTAAAACTTGGATTAGGAGATTTCATTTTCT
ACAGTGTTCTGGTTGGTAAAGCTTCTGCAACAGCCAGTGGAGACTGGAACACAACCATTG
CCTGTTTTGTAGCCATATTAATTGGTTTGTGCCTTACATTACTGCTCCTCGCCATTTTCA
AGAAAGCGTTGCCAGCTCTTCCAATCTCTATCACCTTTGGGCTTGTTTTCTACTTTGCCA
CAGATTATCTTGTGCAACCCTTTATGGACCAATTAGCATTCCATCAATTTTATATCTAGC
ATATTTCCAGTTAGAATCTCATGGATTTTTTCTCCTTTGGCTATAATAAAATCTGGGGAA
AGCAAAGGTGATTTTGCTGTGTCCACATCTAACAAAGTCAGGATTCCCAGCTGGACCTTT
TTGCAGCTTCCTTCCAAGTCTTCCTGACCACCTGCACTTTTGGGCATTGGAAGGAGGTGT
CTACAGAGTGTGGTTTTGAACATATGTCATTGTGATGGACTGAGTCCCTCAGTGCAAAAA
CTACCAGATTTGAGGGACAAGGACAAGGACAAGTGATGGGCCAAAAAGTCGCTGTGCTCC
CACCAGCAGTTTGACCACTGGTCACAGGTGGATTTTACCAACGCTGCAGACTCTCAGGAC
TATCATTACCAAGAGCTTAAATGAAACGGTTTAAACCAAACAGGACTCTTCATCTTAAAC
TACATGGTGAAAGTCAACCTAATAAAACCTGTATTGAATTCTGAACCTTCTCGGGAGATC
CTATAAGGAGAGCAGGCACCAGCAGCAAAGTGGAAAGATGGAAAGGGGCTCAGACTTTCA
CTTTCAGACTTTCTTGCTGCAGACTTAACCATTTTTAAATAAGACTTTCTTCTTCCCCCT
GAGTCAAGTCAGATGTATAGGTTGATTTTGACAGTTCTTGTTCTCAAGCACTGAAACTCA
TTACCACCTATGGTGCCATTTCTTCGCAAGGCCAGTCTGAACTTACCTGAGGTTGCTTCT
TCTTTAAAAGTCTTGACCTCAGGTTCCAAATTCAGTAACTTCTGGAAATAATGGAACATA
ATGATTCTCTACCACCCGTAGGTAAATTCCAGGTTTCCCACCGAATTCCTAATTTGTAGG
CATACCTGTAGGTTCACTTGCCCCCATGTGCCTCTCTTGTTCCCTCTCTCTCCCTTCACT
CCCCTCCAAGGCACTTCTGTACAGTGAATATGGCAGCTCTGTTGTGGGAGCAGACGGTCC
AGTTATTCTAGGATTTTGCTCTTTGTGTGGTACAGAGAACGTGTCATGAATCAGTGCTCT
TGGCCTTGCTGTTGCCATTTCTTCAACAGCAAATACAATGTGTGCCCAAAGACAGTAGAA
TTAAAGAAGAGTAAAATGGCTGTT
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1-205, gnl|bosTau2|chr10 (59680382-59680586) |
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1-205, gnl|canFam2|chr8 (49575534-49575778) |
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1-205, gnl|danRer3|chr19 (37602888-37602639) |
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1-205, gnl|dasNov1|scaffold_183917 (3311-3554) |
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1-205, gnl|echTel1|scaffold_316871 (2274-2499) |
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1-205, gnl|fr1|chrUn (225871401-225871653) |
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1-205, gnl|galGal2|chr5 (23632299-23632065) |
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1-205, gnl|hg17|chr14 (72729085-72729330) |
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1-205, gnl|Hg17|chr14 (72729119-72729323) |
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1-205, gnl|loxAfr1|scaffold_68195 (7942-8167) |
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1-205, gnl|mm7|chr12 (81720512-81720758) |
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1-205, gnl|Mm7|chr12 (81720547-81720751) |
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1-205, gnl|monDom2|scaffold_8 (62075244-62074995) |
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1-205, gnl|oryCun1|scaffold_103374 (3727-3968) |
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1-205, gnl|panTro1|chr15 (72515513-72515758) |
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1-205, gnl|rheMac2|chr7 (136311846-136312091) |
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1-205, gnl|rn3|chr6 (107770281-107770519) |
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1-205, gnl|tetNig1|chr10 (11692608-11692351) |
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1-205, gnl|xenTro1|scaffold_799 (551570-551320) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-205, gnl|bosTau2|chr10 (59680382-59680586) |
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1-205, gnl|canFam2|chr8 (49575534-49575778) |
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1-205, gnl|danRer3|chr19 (37602888-37602639) |
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1-205, gnl|dasNov1|scaffold_183917 (3311-3554) |
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1-205, gnl|echTel1|scaffold_316871 (2274-2499) |
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1-205, gnl|fr1|chrUn (225871401-225871653) |
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1-205, gnl|galGal2|chr5 (23632299-23632065) |
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1-205, gnl|hg17|chr14 (72729085-72729330) |
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1-205, gnl|Hg17|chr14 (72729119-72729323) |
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1-205, gnl|loxAfr1|scaffold_68195 (7942-8167) |
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1-205, gnl|mm7|chr12 (81720512-81720758) |
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1-205, gnl|Mm7|chr12 (81720547-81720751) |
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1-205, gnl|monDom2|scaffold_8 (62075244-62074995) |
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1-205, gnl|oryCun1|scaffold_103374 (3727-3968) |
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1-205, gnl|panTro1|chr15 (72515513-72515758) |
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1-205, gnl|rheMac2|chr7 (136311846-136312091) |
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1-205, gnl|rn3|chr6 (107770281-107770519) |
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1-205, gnl|tetNig1|chr10 (11692608-11692351) |
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1-205, gnl|xenTro1|scaffold_799 (551570-551320) |
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clu (0.239292) |
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hea (0.204499) |
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jej (0.197844) |
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col (0.195008) |
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sag (0.182715) |
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fat (0.147427) |
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lin (0.145603) |
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hyp (0.142837) |
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che (0.136314) |
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ssp (0.13552) |
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pla (0.133672) |
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cbl (0.114797) |
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spc (0.113366) |
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clu (0.239292) |
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hea (0.204499) |
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jej (0.197844) |
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col (0.195008) |
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sag (0.182715) |
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fat (0.147427) |
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lin (0.145603) |
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hyp (0.142837) |
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che (0.136314) |
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ssp (0.13552) |
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pla (0.133672) |
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cbl (0.114797) |
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spc (0.113366) |
