Non-Coding RNA Search

Ss1.1-Pig4-TMW8037O24.3

Sequence:


               
               GAAAGTCCAAATCTTGGTTCTTGGAGAAAGCACCACTCCAAAGCCTCCCTGGCTGGTGTG
CAGGGACCAGGTCCACAGCGGGGAGGACTCATCCGCCACCCACAAGGTACCTGCAAACTC
GACCCAGATGTGGCTGTGTGTGCCCCATATGCCTGTCAGAATGGCTGGCATTTCATTCTC
TTCAAAGAAAGTCGTTTTCTCACCATCCCCAGCCTCAAGGAGCCAAGGAATGGCCATTCA
TGTGGAAGGCCCAGGACTGGTCATCCATCTGACTTTTCTACCACATTAAACCCTCCATTA
AATCCTACCGTAGGTGACGGCTTGAAGTGCAAAGAGCCACATGTGTATATTAACCTATGT
GCCCCTTATTTATTTTTAGACTCCCCACAGCATTCATGTCAATATGGGATTAATGCCTAA
ATTTTGTAAATACTGTACATTTTGTAAATCAACGAATAAAGGTTTTAAGTGTAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGTCCAAATCTTGGTTCTTGGAGAAAGCACCACTCCAAAGCCTCCCTGGCTGGTGTG
CAGGGACCAGGTCCACAGCGGGGAGGACTCATCCGCCACCCACAAGGTACCTGCAAACTC
GACCCAGATGTGGCTGTGTGTGCCCCATATGCCTGTCAGAATGGCTGGCATTTCATTCTC
TTCAAAGAAAGTCGTTTTCTCACCATCCCCAGCCTCAAGGAGCCAAGGAATGGCCATTCA
TGTGGAAGGCCCAGGACTGGTCATCCATCTGACTTTTCTACCACATTAAACCCTCCATTA
AATCCTACCGTAGGTGACGGCTTGAAGTGCAAAGAGCCACATGTGTATATTAACCTATGT
GCCCCTTATTTATTTTTAGACTCCCCACAGCATTCATGTCAATATGGGATTAATGCCTAA
ATTTTGTAAATACTGTACATTTTGTAAATCAACGAATAAAGGTTTTAAGTGTAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-473, gnl|bosTau2|chr2 (32953482-32953948)
               

               
               1-473, gnl|Hg17|chr2 (150155194-150155646)
               

               
               1-473, gnl|Mm7|chr2 (50200428-50200870)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-473, gnl|bosTau2|chr2 (32953482-32953948)
               

               
               1-473, gnl|Hg17|chr2 (150155194-150155646)
               

               
               1-473, gnl|Mm7|chr2 (50200428-50200870)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               hea (0.204499)
               

               
               hlv (0.139256)
               

               
               ute (0.132784)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               hlv (0.139256)
               

               
               ute (0.132784)

	1-473, gnl\|bosTau2\|chr2 (32953482-32953948)
	1-473, gnl\|Hg17\|chr2 (150155194-150155646)
	1-473, gnl\|Mm7\|chr2 (50200428-50200870)