Non-Coding RNA Search

Ss1.1-Pig4-TMW8038D04.5

Sequence:


               
               CAACCCCCTGCCCCGAGAAAAACCCCCTTTGCTCTGCGAACCATCAACGCCCTGGAGGAA
GAAAGTCGTGGCTTTCCTACACAAGTGGAAAGGATTTTTCAGGAGTCTGTGTATCAGATA
CAACAGGCTATATGGAAAGAGACCAGAAATCTGGTACAAAGACAATTGATTGCCTGAGAT
GGGACGTATAACACATGGTGTGCCCTTGTTTTGTAAAGCAAATGGTTTCTCTTCACTTGA
GAAAGCAAATTTCTAGGAAAAGTTTAAATGGAAGATAACCTTGCTCTTATGGGAAAACTG
TAGAGCCCAAGAAAAATAGATTTTTGCAGGACATTCTATAGAATTGAGGTACTTTTTGAT
GTTTCTCTAAACTTGCAATTGTCAGAGTTGCAAAACCTCTGATTCCTCTCACAGCTTTCC
TAGTTCAACAAAGGATATTTTAAATTCACTTTTCTTGTATTGAATTTGAACAAGAACTTA
TATGATAGACATTTTAAAAAATACCATAACACTTTGATTTTGTTCTCAAAAGACACGTTG
GCAAAACAATGGCCTTGAGAAATCTGACAGCTCTCCCTGTTGCGGCACCTCTCACGAATG
TTGCAGGAAAGCCTTCCCAGTATTGTCGTCCAGAAATAGGGATAGCCAGATCAGTTCTCA
CCATTCCAAATGAACTAATCTGGAATGGTGAGAACTGATAAATGTGAAATGAAAAATAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACCCCCTGCCCCGAGAAAAACCCCCTTTGCTCTGCGAACCATCAACGCCCTGGAGGAA
GAAAGTCGTGGCTTTCCTACACAAGTGGAAAGGATTTTTCAGGAGTCTGTGTATCAGATA
CAACAGGCTATATGGAAAGAGACCAGAAATCTGGTACAAAGACAATTGATTGCCTGAGAT
GGGACGTATAACACATGGTGTGCCCTTGTTTTGTAAAGCAAATGGTTTCTCTTCACTTGA
GAAAGCAAATTTCTAGGAAAAGTTTAAATGGAAGATAACCTTGCTCTTATGGGAAAACTG
TAGAGCCCAAGAAAAATAGATTTTTGCAGGACATTCTATAGAATTGAGGTACTTTTTGAT
GTTTCTCTAAACTTGCAATTGTCAGAGTTGCAAAACCTCTGATTCCTCTCACAGCTTTCC
TAGTTCAACAAAGGATATTTTAAATTCACTTTTCTTGTATTGAATTTGAACAAGAACTTA
TATGATAGACATTTTAAAAAATACCATAACACTTTGATTTTGTTCTCAAAAGACACGTTG
GCAAAACAATGGCCTTGAGAAATCTGACAGCTCTCCCTGTTGCGGCACCTCTCACGAATG
TTGCAGGAAAGCCTTCCCAGTATTGTCGTCCAGAAATAGGGATAGCCAGATCAGTTCTCA
CCATTCCAAATGAACTAATCTGGAATGGTGAGAACTGATAAATGTGAAATGAAAAATAGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-263, gnl|bosTau2|chr2 (67377766-67377503)
               

               
               1-263, gnl|Hg17|chr5 (114944322-114944060)
               

               
               1-263, gnl|Mm7|chr18 (46937985-46937729)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-263, gnl|bosTau2|chr2 (67377766-67377503)
               

               
               1-263, gnl|Hg17|chr5 (114944322-114944060)
               

               
               1-263, gnl|Mm7|chr18 (46937985-46937729)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               aor (0.195274)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	1-263, gnl\|bosTau2\|chr2 (67377766-67377503)
	1-263, gnl\|Hg17\|chr5 (114944322-114944060)
	1-263, gnl\|Mm7\|chr18 (46937985-46937729)