Non-Coding RNA Search

Ss1.1-Pig4-TMW8038D13.3

Sequence:


               
               GGGCTGTGTGTGGACACAGAAATCAGATTAAATGGAGCACTGCCAGGCCCGTCTTCTCCA
TCAGGGCTGTTTGGTTGGAGGTGAGGGGCTGGGCTGGCTCCCTGCTTTCGTCTGGCTACT
GACCCCAGGAGCCCATGGAGGAAGCTCAGAACGCTGTACCCGCAGGGCATCTGTCCAGTG
TCTACAAGGTTTTCCTGCTCTTCCTACAGAGGTTAGCATCAGTGCCATCACATGGAAGGC
AGTCATGTCAGCCTTTTGATTTGGGGGTAGAGAGTGGATGGTTACTGGGATGAGCCTTTT
TGATGGGGATGTATGGGAATTGAGTCATGTTGCTAACTCTCTGTATCCCTAATTGCTGGA
GGCTTGGCCCCTAGACCCCACCTACTGGCTTCAGCGCTGTGTTTGGACGTGCTGGTTGGG
ACAGTGTTGTCAGGAGAGTCCCTAATGAGTCATGGCAGACCGACTGTGCTTTTATTCGGT
CTGTTTGGGAGTAAAGTTTTACACTGCCCCTTTTATATACTTGAATGAATTTCGTTTTGG
CAGATTCAGGAGCACTCTGGGAACCAGCCCCGGGTCCTTTTTTCCTATTCCCCATCTGAG
AGCATTTCTCTGCTCTCTAGCCACACGTCTTGGAATGTAATTCTGTTGTGCCTTTGTTTT
TGTCACCTGCCTCCCCCCAAAAGCAACTGCTGTAGGCTTTTTTCTACTTGTCTTTTCTAG
CCCGAAGCCCCACCTTTTTCCTTTTTCCCAGCTGTATTTTCTGGATGCAGTTCTGTGCTC
CAGATGTTTTAAGAACCAGTTACCTCAGACCTCGTGTTGAACAGTGTCACCATCTGGGTC
CTCTCGAAACCGCAGGCTTATGACATACACGCAGGAACGCTGCTGAGTATGGGTACTTAA
TTTGTTTTAAAGTAAAACTCTTCCTGAGGATTGAAAAGGGGGCTCCTGGCAAGTTCTTCA
CAGTCCTGTGGTGGGATGGGTCTAGAGTGTCATCTGAACGGTGCTTCCTGGTTCCTCTTT
GAATTCTGCCATTTTCAGTATTCTCGTGTCTGAATAGGCAAAGTGATTCAACTGGCTGGT
CTTGTACACAAATGAGTTCTGAAAATGCACTCTTTGTGACCCATTTCCAGTCACTAAAGC
TCAAATGTAGAACATTCCCTTAAATGGCAGGATTGAAAACCGCCCCCATCCACCACAGTG
CATTTCGGGAAGACGTCTGTAGCATATGTTGCTGTGAAATTCTGCCTTGCGGGATGTGGC
TGTTTGTCATTTTGATGTATTTTAAATAAATATATATATATATTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCTGTGTGTGGACACAGAAATCAGATTAAATGGAGCACTGCCAGGCCCGTCTTCTCCA
TCAGGGCTGTTTGGTTGGAGGTGAGGGGCTGGGCTGGCTCCCTGCTTTCGTCTGGCTACT
GACCCCAGGAGCCCATGGAGGAAGCTCAGAACGCTGTACCCGCAGGGCATCTGTCCAGTG
TCTACAAGGTTTTCCTGCTCTTCCTACAGAGGTTAGCATCAGTGCCATCACATGGAAGGC
AGTCATGTCAGCCTTTTGATTTGGGGGTAGAGAGTGGATGGTTACTGGGATGAGCCTTTT
TGATGGGGATGTATGGGAATTGAGTCATGTTGCTAACTCTCTGTATCCCTAATTGCTGGA
GGCTTGGCCCCTAGACCCCACCTACTGGCTTCAGCGCTGTGTTTGGACGTGCTGGTTGGG
ACAGTGTTGTCAGGAGAGTCCCTAATGAGTCATGGCAGACCGACTGTGCTTTTATTCGGT
CTGTTTGGGAGTAAAGTTTTACACTGCCCCTTTTATATACTTGAATGAATTTCGTTTTGG
CAGATTCAGGAGCACTCTGGGAACCAGCCCCGGGTCCTTTTTTCCTATTCCCCATCTGAG
AGCATTTCTCTGCTCTCTAGCCACACGTCTTGGAATGTAATTCTGTTGTGCCTTTGTTTT
TGTCACCTGCCTCCCCCCAAAAGCAACTGCTGTAGGCTTTTTTCTACTTGTCTTTTCTAG
CCCGAAGCCCCACCTTTTTCCTTTTTCCCAGCTGTATTTTCTGGATGCAGTTCTGTGCTC
CAGATGTTTTAAGAACCAGTTACCTCAGACCTCGTGTTGAACAGTGTCACCATCTGGGTC
CTCTCGAAACCGCAGGCTTATGACATACACGCAGGAACGCTGCTGAGTATGGGTACTTAA
TTTGTTTTAAAGTAAAACTCTTCCTGAGGATTGAAAAGGGGGCTCCTGGCAAGTTCTTCA
CAGTCCTGTGGTGGGATGGGTCTAGAGTGTCATCTGAACGGTGCTTCCTGGTTCCTCTTT
GAATTCTGCCATTTTCAGTATTCTCGTGTCTGAATAGGCAAAGTGATTCAACTGGCTGGT
CTTGTACACAAATGAGTTCTGAAAATGCACTCTTTGTGACCCATTTCCAGTCACTAAAGC
TCAAATGTAGAACATTCCCTTAAATGGCAGGATTGAAAACCGCCCCCATCCACCACAGTG
CATTTCGGGAAGACGTCTGTAGCATATGTTGCTGTGAAATTCTGCCTTGCGGGATGTGGC
TGTTTGTCATTTTGATGTATTTTAAATAAATATATATATATATTTAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               6-1305, gnl|bosTau2|chr22 (9220960-9222237)
               

               
               6-1305, gnl|Hg17|chr3 (38506380-38507682)
               

               
               6-1305, gnl|Mm7|chr9 (119119303-119120479)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-1305, gnl|bosTau2|chr22 (9220960-9222237)
               

               
               6-1305, gnl|Hg17|chr3 (38506380-38507682)
               

               
               6-1305, gnl|Mm7|chr9 (119119303-119120479)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	6-1305, gnl\|bosTau2\|chr22 (9220960-9222237)
	6-1305, gnl\|Hg17\|chr3 (38506380-38507682)
	6-1305, gnl\|Mm7\|chr9 (119119303-119120479)