Ss1.1-Pig4-TMW8038D22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACGCCTCCCGCCCCCAGCGCACTGCTCGGGACGCTCACCCGGAGGCAGCCTGCGCTGGG AATGGGAAGAGCCACAACCCCATCGCGTCCGCAGATGCAGCCTTAAAACAAAAGAGAAAG GAAGACGGGGAAAAAGAGCCGGCGGCTCGGCGGCGGTGTCCTCCCCTCCTCTGCCGTGTC CCCTCGGTTGCAGGCACTGGACATGGGGCGGCTCCAGGTGTTCGCGCTGAGTTTCCTAGC CCTATGCGGAGCCCAAGTGAGCGCTCAAGAACCCGAGTTCAGCTACGGCTGCGCGGAGGG CAGCTGCTACCCGGCCACTGGCGACCTTCTCATCGGCCGAGCGCAGAAGCTCTCGGTGAC CTCGACCTGCGGGCTTCACAAGCCGGAGCCATACTGCATCGTCAGCCACCTGCAGGAGGA CAAAAAATGCTTTATATGCAACTCGCAAGATCCTTATCATGAAACCCTTAATCCTGACAG TCATCTCATTGAAAATGTGGTCACCACATTTGCTCCAAACCGCCTGAAGATTTGGTGGCA ATCCGAAAATGGTGTGGAAAATGTAACGATTCAGTTGGATTTGGAAGCAGAATTCCATTT TACTCATCTCATAATGACCTTCAAGACATTCCGTCCAGCCGCTATGCTGATAGAACGATC GTCCGACTTTGGAAGAACCTGGGGTGTGTACAGATACTTTGCCTATGACTGTGAGAGCTC ATTTCCCGGCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACGCCTCCCGCCCCCAGCGCACTGCTCGGGACGCTCACCCGGAGGCAGCCTGCGCTGGG AATGGGAAGAGCCACAACCCCATCGCGTCCGCAGATGCAGCCTTAAAACAAAAGAGAAAG GAAGACGGGGAAAAAGAGCCGGCGGCTCGGCGGCGGTGTCCTCCCCTCCTCTGCCGTGTC CCCTCGGTTGCAGGCACTGGACATGGGGCGGCTCCAGGTGTTCGCGCTGAGTTTCCTAGC CCTATGCGGAGCCCAAGTGAGCGCTCAAGAACCCGAGTTCAGCTACGGCTGCGCGGAGGG CAGCTGCTACCCGGCCACTGGCGACCTTCTCATCGGCCGAGCGCAGAAGCTCTCGGTGAC CTCGACCTGCGGGCTTCACAAGCCGGAGCCATACTGCATCGTCAGCCACCTGCAGGAGGA CAAAAAATGCTTTATATGCAACTCGCAAGATCCTTATCATGAAACCCTTAATCCTGACAG TCATCTCATTGAAAATGTGGTCACCACATTTGCTCCAAACCGCCTGAAGATTTGGTGGCA ATCCGAAAATGGTGTGGAAAATGTAACGATTCAGTTGGATTTGGAAGCAGAATTCCATTT TACTCATCTCATAATGACCTTCAAGACATTCCGTCCAGCCGCTATGCTGATAGAACGATC GTCCGACTTTGGAAGAACCTGGGGTGTGTACAGATACTTTGCCTATGACTGTGAGAGCTC ATTTCCCGGCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 238-416, gnl|bosTau2|chr4 (20106618-20106796) | |
| 238-416, gnl|canFam2|chr18 (15618315-15618130) | |
| 238-416, gnl|danRer3|chr23 (21999572-21999406) | |
| 238-416, gnl|dasNov1|scaffold_1020 (104957-105142) | |
| 238-416, gnl|echTel1|scaffold_318826 (85599-85781) | |
| 238-416, gnl|fr1|chrUn (257014201-257014046) | |
| 238-416, gnl|galGal2|chr1 (8780099-8779920) | |
| 238-416, gnl|hg17|chr7 (107235941-107236126) | |
| 238-416, gnl|Hg17|chr7 (107236131-107235953) | |
| 238-416, gnl|loxAfr1|scaffold_32674 (864-679) | |
| 238-416, gnl|mm7|chr12 (29106587-29106404) | |
| 238-416, gnl|Mm7|chr12 (29106397-29106575) | |
| 238-416, gnl|monDom2|scaffold_22 (44522678-44522494) | |
| 238-416, gnl|oryCun1|scaffold_212465 (35500-35323) | |
| 238-416, gnl|panTro1|chr6 (109151938-109152123) | |
| 238-416, gnl|rheMac2|chr3 (145420268-145420453) | |
| 238-416, gnl|rn3|chr6 (49120405-49120224) | |
| 238-416, gnl|tetNig1|chr13 (11453763-11453940) | |
| 238-416, gnl|xenTro1|scaffold_452 (861652-861822) | |
| 624-731, gnl|bosTau2|chr4 (20121847-20121954) | |
| 624-731, gnl|canFam2|chr18 (15629625-15629413) | |
| 624-731, gnl|danRer3|chr23 (22010141-22009931) | |
| 624-731, gnl|dasNov1|scaffold_1020 (83031-83242) | |
| 624-731, gnl|echTel1|scaffold_246298 (888-666) | |
| 624-731, gnl|fr1|chrUn (264957904-264958110) | |
| 624-731, gnl|galGal2|chr1 (8784545-8784338) | |
| 624-731, gnl|hg17|chr7 (107220567-107220778) | |
| 624-731, gnl|Hg17|chr7 (107220761-107220654) | |
| 624-731, gnl|loxAfr1|scaffold_1662 (10498-10708) | |
| 624-731, gnl|mm7|chr12 (29118364-29118154) | |
| 624-731, gnl|Mm7|chr12 (29118168-29118275) | |
| 624-731, gnl|monDom2|scaffold_22 (44535236-44535024) | |
| 624-731, gnl|oryCun1|scaffold_212465 (49673-49461) | |
| 624-731, gnl|panTro1|chr6 (109136698-109136909) | |
| 624-731, gnl|rheMac2|chr3 (145405110-145405321) | |
| 624-731, gnl|rn3|chr6 (49132063-49131853) | |
| 624-731, gnl|tetNig1|chr13 (11451644-11451847) | |
| 624-731, gnl|xenTro1|scaffold_452 (859414-859624) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 238-416, gnl|bosTau2|chr4 (20106618-20106796) | |
| 238-416, gnl|canFam2|chr18 (15618315-15618130) | |
| 238-416, gnl|danRer3|chr23 (21999572-21999406) | |
| 238-416, gnl|dasNov1|scaffold_1020 (104957-105142) | |
| 238-416, gnl|echTel1|scaffold_318826 (85599-85781) | |
| 238-416, gnl|fr1|chrUn (257014201-257014046) | |
| 238-416, gnl|galGal2|chr1 (8780099-8779920) | |
| 238-416, gnl|hg17|chr7 (107235941-107236126) | |
| 238-416, gnl|Hg17|chr7 (107236131-107235953) | |
| 238-416, gnl|loxAfr1|scaffold_32674 (864-679) | |
| 238-416, gnl|mm7|chr12 (29106587-29106404) | |
| 238-416, gnl|Mm7|chr12 (29106397-29106575) | |
| 238-416, gnl|monDom2|scaffold_22 (44522678-44522494) | |
| 238-416, gnl|oryCun1|scaffold_212465 (35500-35323) | |
| 238-416, gnl|panTro1|chr6 (109151938-109152123) | |
| 238-416, gnl|rheMac2|chr3 (145420268-145420453) | |
| 238-416, gnl|rn3|chr6 (49120405-49120224) | |
| 238-416, gnl|tetNig1|chr13 (11453763-11453940) | |
| 238-416, gnl|xenTro1|scaffold_452 (861652-861822) | |
| 624-731, gnl|bosTau2|chr4 (20121847-20121954) | |
| 624-731, gnl|canFam2|chr18 (15629625-15629413) | |
| 624-731, gnl|danRer3|chr23 (22010141-22009931) | |
| 624-731, gnl|dasNov1|scaffold_1020 (83031-83242) | |
| 624-731, gnl|echTel1|scaffold_246298 (888-666) | |
| 624-731, gnl|fr1|chrUn (264957904-264958110) | |
| 624-731, gnl|galGal2|chr1 (8784545-8784338) | |
| 624-731, gnl|hg17|chr7 (107220567-107220778) | |
| 624-731, gnl|Hg17|chr7 (107220761-107220654) | |
| 624-731, gnl|loxAfr1|scaffold_1662 (10498-10708) | |
| 624-731, gnl|mm7|chr12 (29118364-29118154) | |
| 624-731, gnl|Mm7|chr12 (29118168-29118275) | |
| 624-731, gnl|monDom2|scaffold_22 (44535236-44535024) | |
| 624-731, gnl|oryCun1|scaffold_212465 (49673-49461) | |
| 624-731, gnl|panTro1|chr6 (109136698-109136909) | |
| 624-731, gnl|rheMac2|chr3 (145405110-145405321) | |
| 624-731, gnl|rn3|chr6 (49132063-49131853) | |
| 624-731, gnl|tetNig1|chr13 (11451644-11451847) | |
| 624-731, gnl|xenTro1|scaffold_452 (859414-859624) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |