Ss1.1-Pig4-TMW8038F01.3
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GCAAGAGTGGGTCCAAAGGCGTAAGTCAGAGTTGCCTGTGCCGATTAGTGGCCTCCAGGC
GTGAAATCCCACCCTTGAAGGCAGCTGCCCTTTTGGCATCTACCAACCAAAAGGTGACCA
TTCCTTAGAGACCCCAGTCCTCCCTCGCTTGGCCCAGATTCACCATTCTGCTCGATGTCA
CCTCCTGACCCTCGAGAAAGGTTTCTTTTGAAGAGTTCCCGCCTTCTGCCCTCCTCCCCA
TGGCTGCCATCAGCCCCTCATCCTCAGCCCCTCTGTCATCACCTTAAACAGGACTTCAGT
GATTCCCCAACTTTATTTTTTACAGGATGAGACTCCCTTTAACCCACCCTCCAGCCATCA
CCGGAGGGCAGAGCTATGACAGTGGGAAGAAGGGAAAGAAACTCCATGGTAAATTAGACC
TCCGGACTGTTGGCTGGGAATTAACCCAAGGAAGAGGGCAGTGCCTGATTGCTACCTGTG
GATGGAGGGTTTGCAGCAATTTCTAAGAGACGGACCAGAGGCTGAAAATGGCCAGTGGGT
GTGATTTTAAAGAGTTGGGATGATGTGGAGCTGGGAGCCGAAGGTGCTGTAGGCAAGGAA
GGTGAGTTAAACTGGGCAGTGTTTTTATAAACATGTAACAAGGAGTCAGATTTGTGTTAG
AAATAAATAAAAAACTAAAGGACCTTTTCGGCTGTGACTTTCAAGTACCACCCTCGTGGA
TGGCAGAGGTTTCCAATATGCAAAGACGAGATTTCCATGTGAAATCTTAGACTCGTTTTG
CATCTGCAGCCTCGGATTTGTGGTTGCCTCGTGGTGAGGACCGTGACCCTGAGCCTGGTG
CCCAGGAGGAAGGAGTCTGCCAGGCCTCAGCAGGGTCTTGGGCTTTTGGGTTTATTCCCC
CGGTGCTCCAAGTTGAATCATCTTCCATCCCTCACAAGAACCACTGAGCCCAGGCTGTAG
CTTCTGGGCCTGGGCTGGGGCCTGCCTCCTGAGGGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCAAGAGTGGGTCCAAAGGCGTAAGTCAGAGTTGCCTGTGCCGATTAGTGGCCTCCAGGC
GTGAAATCCCACCCTTGAAGGCAGCTGCCCTTTTGGCATCTACCAACCAAAAGGTGACCA
TTCCTTAGAGACCCCAGTCCTCCCTCGCTTGGCCCAGATTCACCATTCTGCTCGATGTCA
CCTCCTGACCCTCGAGAAAGGTTTCTTTTGAAGAGTTCCCGCCTTCTGCCCTCCTCCCCA
TGGCTGCCATCAGCCCCTCATCCTCAGCCCCTCTGTCATCACCTTAAACAGGACTTCAGT
GATTCCCCAACTTTATTTTTTACAGGATGAGACTCCCTTTAACCCACCCTCCAGCCATCA
CCGGAGGGCAGAGCTATGACAGTGGGAAGAAGGGAAAGAAACTCCATGGTAAATTAGACC
TCCGGACTGTTGGCTGGGAATTAACCCAAGGAAGAGGGCAGTGCCTGATTGCTACCTGTG
GATGGAGGGTTTGCAGCAATTTCTAAGAGACGGACCAGAGGCTGAAAATGGCCAGTGGGT
GTGATTTTAAAGAGTTGGGATGATGTGGAGCTGGGAGCCGAAGGTGCTGTAGGCAAGGAA
GGTGAGTTAAACTGGGCAGTGTTTTTATAAACATGTAACAAGGAGTCAGATTTGTGTTAG
AAATAAATAAAAAACTAAAGGACCTTTTCGGCTGTGACTTTCAAGTACCACCCTCGTGGA
TGGCAGAGGTTTCCAATATGCAAAGACGAGATTTCCATGTGAAATCTTAGACTCGTTTTG
CATCTGCAGCCTCGGATTTGTGGTTGCCTCGTGGTGAGGACCGTGACCCTGAGCCTGGTG
CCCAGGAGGAAGGAGTCTGCCAGGCCTCAGCAGGGTCTTGGGCTTTTGGGTTTATTCCCC
CGGTGCTCCAAGTTGAATCATCTTCCATCCCTCACAAGAACCACTGAGCCCAGGCTGTAG
CTTCTGGGCCTGGGCTGGGGCCTGCCTCCTGAGGGG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
11-643, gnl|bosTau2|chr29 (13506864-13506219) |
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11-643, gnl|Hg17|chr11 (78043792-78043212) |
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11-643, gnl|Mm7|chr7 (92940678-92941299) |
| |
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676-990, gnl|bosTau2|chr29 (13505971-13505654) |
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676-990, gnl|canFam2|chr21 (23237177-23236821) |
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676-990, gnl|echTel1|scaffold_311248 (13926-14247) |
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676-990, gnl|hg17|chr11 (78042724-78043062) |
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676-990, gnl|Hg17|chr11 (78043182-78042866) |
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676-990, gnl|loxAfr1|scaffold_18101 (22526-22866) |
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676-990, gnl|mm7|chr7 (92941737-92941400) |
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676-990, gnl|monDom2|scaffold_46 (11234120-11233667) |
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676-990, gnl|oryCun1|scaffold_75598 (1219-914) |
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676-990, gnl|panTro1|chr9 (79386014-79386352) |
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676-990, gnl|rheMac2|chr14 (76866269-76866607) |
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676-990, gnl|rn3|chr1 (154254616-154254279) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
11-643, gnl|bosTau2|chr29 (13506864-13506219) |
|
11-643, gnl|Hg17|chr11 (78043792-78043212) |
|
11-643, gnl|Mm7|chr7 (92940678-92941299) |
| |
|
676-990, gnl|bosTau2|chr29 (13505971-13505654) |
|
676-990, gnl|canFam2|chr21 (23237177-23236821) |
|
676-990, gnl|echTel1|scaffold_311248 (13926-14247) |
|
676-990, gnl|hg17|chr11 (78042724-78043062) |
|
676-990, gnl|Hg17|chr11 (78043182-78042866) |
|
676-990, gnl|loxAfr1|scaffold_18101 (22526-22866) |
|
676-990, gnl|mm7|chr7 (92941737-92941400) |
|
676-990, gnl|monDom2|scaffold_46 (11234120-11233667) |
|
676-990, gnl|oryCun1|scaffold_75598 (1219-914) |
|
676-990, gnl|panTro1|chr9 (79386014-79386352) |
|
676-990, gnl|rheMac2|chr14 (76866269-76866607) |
|
676-990, gnl|rn3|chr1 (154254616-154254279) |
