Non-Coding RNA Search

Ss1.1-Pig4-TMW8038I13.5

Sequence:


               
               CGACTCGCTGTGCTGTTTGGTTGCCACCTGTTTGGTTGGACAGGCTTTTAGCCAATGGCA
GCTGACGGGGGTGGGGGGGTGAGCCCCATAGGACGCATGGTGACCCCCAGTTTCCCCTGC
ATTTCCCCAGAGGTAGATGGACAGTGAGCGATGTTGGAAGACGAAGTAGAAGCAGTCTTT
GAAAAAGAATAGGTGGCATCTTCCCTCCACATGCAAATGGATTGAAACTTTTTGACGATG
GGGAAAGCAGGTCTTCAAAAGGCCCCGACCTGAACCTGGGGCTTTGCGATGCCCAGTGAC
TGGCCTGCCAGGTGAGGATGGAAGAAGCTGCTTTTCCCTCTGCTGCACGCCCAGCCAGGA
ACAGCCTCCCCTCAGCCACCAAAGATAAGCAGGAACAAGATATGGCCATCTGCCGCCTGT
CAGGGTCTGATGAGAAAGGGGCTTCTGAAGTGGGGGTTCCATATTAAAACAAAATGTGCC
TTAAAAGAAAACCCACATGCTTTTGTACTTTTGTGAAATGATTTTAATTATCCTGCATGT
GTATTTTGCCCACTTTTCTGAAATTCCAGGAAAATGTTTCTTGGGTTTGGAATGTGACCA
AGGAAGCAATATTGTACAGAGCACCGTATTGTTAATTTTTTTTTTAGAATCATGTACAGA
CCTTATATGTAATTTATATATGGTTTTTGTATGCCATTTTCATTGAAATATTTTGAGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGACTCGCTGTGCTGTTTGGTTGCCACCTGTTTGGTTGGACAGGCTTTTAGCCAATGGCA
GCTGACGGGGGTGGGGGGGTGAGCCCCATAGGACGCATGGTGACCCCCAGTTTCCCCTGC
ATTTCCCCAGAGGTAGATGGACAGTGAGCGATGTTGGAAGACGAAGTAGAAGCAGTCTTT
GAAAAAGAATAGGTGGCATCTTCCCTCCACATGCAAATGGATTGAAACTTTTTGACGATG
GGGAAAGCAGGTCTTCAAAAGGCCCCGACCTGAACCTGGGGCTTTGCGATGCCCAGTGAC
TGGCCTGCCAGGTGAGGATGGAAGAAGCTGCTTTTCCCTCTGCTGCACGCCCAGCCAGGA
ACAGCCTCCCCTCAGCCACCAAAGATAAGCAGGAACAAGATATGGCCATCTGCCGCCTGT
CAGGGTCTGATGAGAAAGGGGCTTCTGAAGTGGGGGTTCCATATTAAAACAAAATGTGCC
TTAAAAGAAAACCCACATGCTTTTGTACTTTTGTGAAATGATTTTAATTATCCTGCATGT
GTATTTTGCCCACTTTTCTGAAATTCCAGGAAAATGTTTCTTGGGTTTGGAATGTGACCA
AGGAAGCAATATTGTACAGAGCACCGTATTGTTAATTTTTTTTTTAGAATCATGTACAGA
CCTTATATGTAATTTATATATGGTTTTTGTATGCCATTTTCATTGAAATATTTTGAGCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               24-720, gnl|bosTau2|chr8 (45958214-45958872)
               

               
               24-720, gnl|Hg17|chr9 (91565306-91564652)
               

               
               24-720, gnl|Mm7|chr13 (52150830-52150146)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-720, gnl|bosTau2|chr8 (45958214-45958872)
               

               
               24-720, gnl|Hg17|chr9 (91565306-91564652)
               

               
               24-720, gnl|Mm7|chr13 (52150830-52150146)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               cly (0.120642)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               cly (0.120642)

	24-720, gnl\|bosTau2\|chr8 (45958214-45958872)
	24-720, gnl\|Hg17\|chr9 (91565306-91564652)
	24-720, gnl\|Mm7\|chr13 (52150830-52150146)