Ss1.1-Pig4-TMW8038O10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TACACCATTCAGGAAGGTGATGCTCTCTTAAAAAACCTTCATTCTCGCCCTCGAAGACTT AATGATCACATAAGCAGTCTCCAGGAGGAAGATGCCTTACTGAAGGAGGAGAGCAGCCTC TACGACGACATTGTGTTCGTGGACGTTGTCGACACTTACCGAAATGTTCCTGCAAAGTTA CTGAACTTCTATAAATGGACTGTGGAGACAACCAGCTTTGATCTGTTGCTAAAGACAGAT GACGACTGTTACATAGACTTGGAAGCTGTTTTTAATAGAATTGCCCTCAAGAAGCTGGAC GGGCCTAATTTTTGGTGGGGAAATTTCAGGTTGAATTGGGCCGTTGACCGGACGGGGAAG TGGCAGGAGCTGGAGTACCCTGGGCCAGCCTACCCCGCCTTTGCCTGTGGGTCAGGGTAC ATGATCTCCAGCGACATCGTCCGCTGGCTGGCCAGTAACTCGGGCAGACTGAAGACATAC CAGTGTGAAGATGTGAGCATGGGCATCTGGATGGCAGCCATAGGACCGAAGCGATACCAG GACGGGCTGTGGCTGTGTGAGAAGACCTGTGAGACAGGGATGCTGTCCTCGCCTCAGTAC TCGCCCCAGGAGCTGAAACAGCTGTGGAAGCTGAAGGAGCTGTGCGGGGACCCTTGTCAG TGTGACGCAAGATGACGCTGTGCATCCTCGGTGTTAAAGGTCAGGGTGGCCCGGAGCCTG TCTGAGGAAAGCCCAATGTTTGGCCTCAGACTGTATTGCCTTTCAGGACAGTTCTTGGCT GGCACTTTGACCTGTCACTCAGTGTGGTGTTTCTTAATGTTTGCACAAAATTTCCTTTTT AAAAAATCAACAGATCCTGTGGCATAAGAAAAATTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TACACCATTCAGGAAGGTGATGCTCTCTTAAAAAACCTTCATTCTCGCCCTCGAAGACTT AATGATCACATAAGCAGTCTCCAGGAGGAAGATGCCTTACTGAAGGAGGAGAGCAGCCTC TACGACGACATTGTGTTCGTGGACGTTGTCGACACTTACCGAAATGTTCCTGCAAAGTTA CTGAACTTCTATAAATGGACTGTGGAGACAACCAGCTTTGATCTGTTGCTAAAGACAGAT GACGACTGTTACATAGACTTGGAAGCTGTTTTTAATAGAATTGCCCTCAAGAAGCTGGAC GGGCCTAATTTTTGGTGGGGAAATTTCAGGTTGAATTGGGCCGTTGACCGGACGGGGAAG TGGCAGGAGCTGGAGTACCCTGGGCCAGCCTACCCCGCCTTTGCCTGTGGGTCAGGGTAC ATGATCTCCAGCGACATCGTCCGCTGGCTGGCCAGTAACTCGGGCAGACTGAAGACATAC CAGTGTGAAGATGTGAGCATGGGCATCTGGATGGCAGCCATAGGACCGAAGCGATACCAG GACGGGCTGTGGCTGTGTGAGAAGACCTGTGAGACAGGGATGCTGTCCTCGCCTCAGTAC TCGCCCCAGGAGCTGAAACAGCTGTGGAAGCTGAAGGAGCTGTGCGGGGACCCTTGTCAG TGTGACGCAAGATGACGCTGTGCATCCTCGGTGTTAAAGGTCAGGGTGGCCCGGAGCCTG TCTGAGGAAAGCCCAATGTTTGGCCTCAGACTGTATTGCCTTTCAGGACAGTTCTTGGCT GGCACTTTGACCTGTCACTCAGTGTGGTGTTTCTTAATGTTTGCACAAAATTTCCTTTTT AAAAAATCAACAGATCCTGTGGCATAAGAAAAATTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 13-203, gnl|bosTau2|chr28 (2961730-2961920) | |
| 13-203, gnl|canFam2|chr4 (7481459-7481312) | |
| 13-203, gnl|danRer3|chrNA (72351575-72351690) | |
| 13-203, gnl|dasNov1|scaffold_2442 (83017-83164) | |
| 13-203, gnl|echTel1|scaffold_193865 (1302-1449) | |
| 13-203, gnl|galGal2|chr3 (34179504-34179632) | |
| 13-203, gnl|hg17|chr1 (231947918-231948065) | |
| 13-203, gnl|Hg17|chr1 (231948136-231947946) | |
| 13-203, gnl|loxAfr1|scaffold_10535 (64913-64766) | |
| 13-203, gnl|mm7|chr13 (13357344-13357203) | |
| 13-203, gnl|Mm7|chr13 (13357130-13357320) | |
| 13-203, gnl|monDom2|scaffold_13 (50213691-50213568) | |
| 13-203, gnl|panTro1|chr1 (215780038-215780185) | |
| 13-203, gnl|rheMac2|chr1 (221553195-221553048) | |
| 13-203, gnl|rn3|chr17 (59550190-59550328) | |
| 13-203, gnl|tetNig1|chr17 (1969967-1969850) | |
| 13-203, gnl|xenTro1|scaffold_371 (821527-821410) | |
| 324-483, gnl|bosTau2|chr28 (2964771-2964930) | |
| 324-483, gnl|canFam2|chr4 (7484641-7484449) | |
| 324-483, gnl|danRer3|chrNA (72346569-72346776) | |
| 324-483, gnl|dasNov1|scaffold_2442 (79721-79915) | |
| 324-483, gnl|echTel1|scaffold_204055 (703-891) | |
| 324-483, gnl|galGal2|chr3 (34176336-34176510) | |
| 324-483, gnl|hg17|chr1 (231943490-231943686) | |
| 324-483, gnl|Hg17|chr1 (231943668-231943509) | |
| 324-483, gnl|loxAfr1|scaffold_10535 (68794-68607) | |
| 324-483, gnl|mm7|chr13 (13361047-13360861) | |
| 324-483, gnl|Mm7|chr13 (13360878-13361037) | |
| 324-483, gnl|monDom2|scaffold_13 (50216712-50216517) | |
| 324-483, gnl|oryCun1|scaffold_194891 (7938-8120) | |
| 324-483, gnl|panTro1|chr1 (215775584-215775780) | |
| 324-483, gnl|rheMac2|chr1 (221557629-221557433) | |
| 324-483, gnl|rn3|chr17 (59547085-59547267) | |
| 324-483, gnl|tetNig1|chr17 (1970635-1970468) | |
| 324-483, gnl|xenTro1|scaffold_371 (827485-827304) | |
| 538-876, gnl|bosTau2|chr28 (2966707-2967048) | |
| 538-876, gnl|Hg17|chr1 (231939699-231939347) | |
| 538-876, gnl|Mm7|chr13 (13362652-13362928) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-203, gnl|bosTau2|chr28 (2961730-2961920) | |
| 13-203, gnl|canFam2|chr4 (7481459-7481312) | |
| 13-203, gnl|danRer3|chrNA (72351575-72351690) | |
| 13-203, gnl|dasNov1|scaffold_2442 (83017-83164) | |
| 13-203, gnl|echTel1|scaffold_193865 (1302-1449) | |
| 13-203, gnl|galGal2|chr3 (34179504-34179632) | |
| 13-203, gnl|hg17|chr1 (231947918-231948065) | |
| 13-203, gnl|Hg17|chr1 (231948136-231947946) | |
| 13-203, gnl|loxAfr1|scaffold_10535 (64913-64766) | |
| 13-203, gnl|mm7|chr13 (13357344-13357203) | |
| 13-203, gnl|Mm7|chr13 (13357130-13357320) | |
| 13-203, gnl|monDom2|scaffold_13 (50213691-50213568) | |
| 13-203, gnl|panTro1|chr1 (215780038-215780185) | |
| 13-203, gnl|rheMac2|chr1 (221553195-221553048) | |
| 13-203, gnl|rn3|chr17 (59550190-59550328) | |
| 13-203, gnl|tetNig1|chr17 (1969967-1969850) | |
| 13-203, gnl|xenTro1|scaffold_371 (821527-821410) | |
| 324-483, gnl|bosTau2|chr28 (2964771-2964930) | |
| 324-483, gnl|canFam2|chr4 (7484641-7484449) | |
| 324-483, gnl|danRer3|chrNA (72346569-72346776) | |
| 324-483, gnl|dasNov1|scaffold_2442 (79721-79915) | |
| 324-483, gnl|echTel1|scaffold_204055 (703-891) | |
| 324-483, gnl|galGal2|chr3 (34176336-34176510) | |
| 324-483, gnl|hg17|chr1 (231943490-231943686) | |
| 324-483, gnl|Hg17|chr1 (231943668-231943509) | |
| 324-483, gnl|loxAfr1|scaffold_10535 (68794-68607) | |
| 324-483, gnl|mm7|chr13 (13361047-13360861) | |
| 324-483, gnl|Mm7|chr13 (13360878-13361037) | |
| 324-483, gnl|monDom2|scaffold_13 (50216712-50216517) | |
| 324-483, gnl|oryCun1|scaffold_194891 (7938-8120) | |
| 324-483, gnl|panTro1|chr1 (215775584-215775780) | |
| 324-483, gnl|rheMac2|chr1 (221557629-221557433) | |
| 324-483, gnl|rn3|chr17 (59547085-59547267) | |
| 324-483, gnl|tetNig1|chr17 (1970635-1970468) | |
| 324-483, gnl|xenTro1|scaffold_371 (827485-827304) | |
| 538-876, gnl|bosTau2|chr28 (2966707-2967048) | |
| 538-876, gnl|Hg17|chr1 (231939699-231939347) | |
| 538-876, gnl|Mm7|chr13 (13362652-13362928) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |