Non-Coding RNA Search

Ss1.1-Pig4-TMW8038P15.5

Sequence:


               
               GGCGTGATTCTCGGAACCCGAGGAGGAGCGGCGTCTGTGGCTATGGCTGTCTTGCTGCCC
CTTCCTGCAGTGTTCACACACACCCACGCATTCGTTCTGTCCTTCCAGAACCAGAGTGTT
GCGCCCTAGGTCCCGCCAGAATTACAACCATTTCGTAAAGGATGGATGGAGGGCCAAGGA
GGATGTGAATCGGGCTCTCCGCGTTTATCTTTTGCTGAACTGTTGCTGGAGTTAAAAAAA
GAAATACTGCTCACGCGCAACCGCCTCATGTTCTAGGCCCTGCCGTGGGTAACACAGAAA
CCTAACGTTGAAAACCTGCAGGCTTTAGTAATACAGAAAATGTTGTGATGCCTAATACCT
CATTAGTTTTCCTCCTTGATTGAGTATGTGGGGCACGTGTTCAGAAAAAGCTGTTGAGGT
TCTCAGTCTTTCAAAAGCTTGGGTATTTTTGCTGCTTTAAAAAGTCCACAGCTAAAATTT
TATTTATTCAAATATTTGATTGCATCCTCTGGTGGATTTTGAGCTATCTGGCTTAAGTCT
GGCCTCTGAACTCTGTCATTCAAGGAGGATAAAACTAAGGAAGACTTTTTAAAACCTGAT
AAGCGCCTTGACAAAAATAATCAGTTCTGATTTCAGCGTTGTAAATTGCCTACCAAACTA
CTTCTCTGCTAAAAACTAAACTATTAAAATTGGTCATTTCCCTACCGTTCATATCAAAGG
TTCCTGTGCATGATTCATCCTTTGAGCACAAATGCATTAGATAATTGAAGATAAAATGGA
TTATCTGCATTTTATGATAAGCCAAAATAAGGACTCTATGCTAGACAAATGCTGAACATA
AATTTTATTTAAAAACTTTATTGGTTAATTTCTACATGTTTCTACAGTTTCTCTCACTGT
CATATTAAAATTTGAACATGATCCCTAAAAAAAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGTGATTCTCGGAACCCGAGGAGGAGCGGCGTCTGTGGCTATGGCTGTCTTGCTGCCC
CTTCCTGCAGTGTTCACACACACCCACGCATTCGTTCTGTCCTTCCAGAACCAGAGTGTT
GCGCCCTAGGTCCCGCCAGAATTACAACCATTTCGTAAAGGATGGATGGAGGGCCAAGGA
GGATGTGAATCGGGCTCTCCGCGTTTATCTTTTGCTGAACTGTTGCTGGAGTTAAAAAAA
GAAATACTGCTCACGCGCAACCGCCTCATGTTCTAGGCCCTGCCGTGGGTAACACAGAAA
CCTAACGTTGAAAACCTGCAGGCTTTAGTAATACAGAAAATGTTGTGATGCCTAATACCT
CATTAGTTTTCCTCCTTGATTGAGTATGTGGGGCACGTGTTCAGAAAAAGCTGTTGAGGT
TCTCAGTCTTTCAAAAGCTTGGGTATTTTTGCTGCTTTAAAAAGTCCACAGCTAAAATTT
TATTTATTCAAATATTTGATTGCATCCTCTGGTGGATTTTGAGCTATCTGGCTTAAGTCT
GGCCTCTGAACTCTGTCATTCAAGGAGGATAAAACTAAGGAAGACTTTTTAAAACCTGAT
AAGCGCCTTGACAAAAATAATCAGTTCTGATTTCAGCGTTGTAAATTGCCTACCAAACTA
CTTCTCTGCTAAAAACTAAACTATTAAAATTGGTCATTTCCCTACCGTTCATATCAAAGG
TTCCTGTGCATGATTCATCCTTTGAGCACAAATGCATTAGATAATTGAAGATAAAATGGA
TTATCTGCATTTTATGATAAGCCAAAATAAGGACTCTATGCTAGACAAATGCTGAACATA
AATTTTATTTAAAAACTTTATTGGTTAATTTCTACATGTTTCTACAGTTTCTCTCACTGT
CATATTAAAATTTGAACATGATCCCTAAAAAAAGAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               49-927, gnl|bosTau2|chr10 (15918806-15917913)
               

               
               49-927, gnl|Hg17|chr14 (20921546-20920651)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-927, gnl|bosTau2|chr10 (15918806-15917913)
               

               
               49-927, gnl|Hg17|chr14 (20921546-20920651)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               thg (0.126791)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)
               

               
               pgl (0.118483)

	49-927, gnl\|bosTau2\|chr10 (15918806-15917913)
	49-927, gnl\|Hg17\|chr14 (20921546-20920651)