Ss1.1-Pig4-TMW8039C14.3
|
GAACATGGTTGTGGGGGTGGAGTAAGCTGCTGCAATGGCTGAGCCTGGGCTTGCCCTCTC
GCCCTTCAGGACTGGTGCTTGCCAGGCTAGCACCTCCCTCATCGTTTCATCTGATGGACC
AGCTGCTTTTTAACTGTAGTGAAAATGGCTCTGAGCTGGAGGCAGGGATCCTCTGGGCCT
TGGTCTTGAAGATGCCTCTGCAGAGCTCTCCTGAGCTCTCTGCAGTCTCCCGGGGCTCCC
TTTATGTGGCACTCAGAGCTTTAGTTGGGTGGAGCCGCCTGGTGACCCTGTCCCGGGTGA
CAGGGTTTGCTGACATCCTCCACAGCGCAGTCTGGGTCCTCGGCTGCTGGAGCTCTCTTT
TGTCACCTCTGTCAGGATCAGGCGCTGGTTTTGCTGGCTTTGTGCCAGGAATCACCAGCA
TAGAAAAAGGGTTAAGAAGATACGTACATATTCTATTATATAAGGTGTTTTGCGAGTGCT
GTTTTCACTTAAATCTTTCACACACAGCACTGTGTGGCTGCCTTATGTCACACTGGCTGG
GTATCTGGGAGCTGATAACAAGGGAAGAGAGCTTAGCAGACGTCAGGGCCAATAAAACCA
AAGGCTTGGAGTCAGGGGCAGGATGCAGGCAGTATTGTCCAGGCAGAGCACTGTCGAGAA
GCCTTGGGGATGGCAGCAGGAGGAGCACAGGCAGAGGATAGGCGAGTCCTGTCACTGGCG
GAGGCCAGCCCCCTGCATCTCTCTCCGTGGGGACCAGAAACGGGGCTCAGAAGCCCATCC
AGGGAGATTCAGCGCTCCTGGATTGTGGATTATCTTCTGGAGTTGATGCTGATACCAAGT
TTTAATTTTTTTCAGATGTTTCATACTTCCCAAGACAGGAGTGGGAGGCCAAAGTGTTAG
AGACGAGGCCCCTCTGTTGAAGATTCTGGGGAAGGAACCCCGGGGGTGTTGGGTGAGTGA
GGCGCCTCCTCACTTCTGTTCACTCTGAAGATCCGCTTAGTGAGACATTTTCCCGAAACC
TAGATATGGCCTCCCCGGCCCCACTGGGGAGTACCAGGTAGTCAAAAGCAGCCCCTGCAG
TGTCTGTGCCGCCCTCAGGTTGCCCTGTCCCTGCCTTTGGCATTTCGCTAAAACCATGTG
TTTTTGCCAGCGCTGACCTTTTCTCTGTGCACTGCCTGATCAGTATTGAACAATACCTGT
AGATTCTTTTTCAATGCAACGTCAGAACATGATATACTGTACGCTGGGAAATAGTCACCT
TATTTATACACCTGAATCCTCCTATTCCACAAATAAACATCTGCTCAATTCTAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAACATGGTTGTGGGGGTGGAGTAAGCTGCTGCAATGGCTGAGCCTGGGCTTGCCCTCTC
GCCCTTCAGGACTGGTGCTTGCCAGGCTAGCACCTCCCTCATCGTTTCATCTGATGGACC
AGCTGCTTTTTAACTGTAGTGAAAATGGCTCTGAGCTGGAGGCAGGGATCCTCTGGGCCT
TGGTCTTGAAGATGCCTCTGCAGAGCTCTCCTGAGCTCTCTGCAGTCTCCCGGGGCTCCC
TTTATGTGGCACTCAGAGCTTTAGTTGGGTGGAGCCGCCTGGTGACCCTGTCCCGGGTGA
CAGGGTTTGCTGACATCCTCCACAGCGCAGTCTGGGTCCTCGGCTGCTGGAGCTCTCTTT
TGTCACCTCTGTCAGGATCAGGCGCTGGTTTTGCTGGCTTTGTGCCAGGAATCACCAGCA
TAGAAAAAGGGTTAAGAAGATACGTACATATTCTATTATATAAGGTGTTTTGCGAGTGCT
GTTTTCACTTAAATCTTTCACACACAGCACTGTGTGGCTGCCTTATGTCACACTGGCTGG
GTATCTGGGAGCTGATAACAAGGGAAGAGAGCTTAGCAGACGTCAGGGCCAATAAAACCA
AAGGCTTGGAGTCAGGGGCAGGATGCAGGCAGTATTGTCCAGGCAGAGCACTGTCGAGAA
GCCTTGGGGATGGCAGCAGGAGGAGCACAGGCAGAGGATAGGCGAGTCCTGTCACTGGCG
GAGGCCAGCCCCCTGCATCTCTCTCCGTGGGGACCAGAAACGGGGCTCAGAAGCCCATCC
AGGGAGATTCAGCGCTCCTGGATTGTGGATTATCTTCTGGAGTTGATGCTGATACCAAGT
TTTAATTTTTTTCAGATGTTTCATACTTCCCAAGACAGGAGTGGGAGGCCAAAGTGTTAG
AGACGAGGCCCCTCTGTTGAAGATTCTGGGGAAGGAACCCCGGGGGTGTTGGGTGAGTGA
GGCGCCTCCTCACTTCTGTTCACTCTGAAGATCCGCTTAGTGAGACATTTTCCCGAAACC
TAGATATGGCCTCCCCGGCCCCACTGGGGAGTACCAGGTAGTCAAAAGCAGCCCCTGCAG
TGTCTGTGCCGCCCTCAGGTTGCCCTGTCCCTGCCTTTGGCATTTCGCTAAAACCATGTG
TTTTTGCCAGCGCTGACCTTTTCTCTGTGCACTGCCTGATCAGTATTGAACAATACCTGT
AGATTCTTTTTCAATGCAACGTCAGAACATGATATACTGTACGCTGGGAAATAGTCACCT
TATTTATACACCTGAATCCTCCTATTCCACAAATAAACATCTGCTCAATTCTAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
122-1085, gnl|bosTau2|chr13 (30340165-30339212) |
|
122-1085, gnl|Hg17|chr20 (5124977-5126050) |
| |
|
1100-1313, gnl|bosTau2|chr13 (30339012-30338814) |
|
1100-1313, gnl|canFam2|chr24 (19405634-19405401) |
|
1100-1313, gnl|galGal2|chr22 (307322-307105) |
|
1100-1313, gnl|hg17|chr20 (5126335-5126557) |
|
1100-1313, gnl|Hg17|chr20 (5126334-5126533) |
|
1100-1313, gnl|loxAfr1|scaffold_23733 (42334-42564) |
|
1100-1313, gnl|mm7|chr2 (132052701-132052926) |
|
1100-1313, gnl|Mm7|chr2 (132052702-132052903) |
|
1100-1313, gnl|oryCun1|scaffold_189921 (86711-86456) |
|
1100-1313, gnl|panTro1|chr21 (5092582-5092802) |
|
1100-1313, gnl|rheMac2|chr10 (38540102-38540316) |
|
1100-1313, gnl|rn3|chr3 (119976229-119976450) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
122-1085, gnl|bosTau2|chr13 (30340165-30339212) |
|
122-1085, gnl|Hg17|chr20 (5124977-5126050) |
| |
|
1100-1313, gnl|bosTau2|chr13 (30339012-30338814) |
|
1100-1313, gnl|canFam2|chr24 (19405634-19405401) |
|
1100-1313, gnl|galGal2|chr22 (307322-307105) |
|
1100-1313, gnl|hg17|chr20 (5126335-5126557) |
|
1100-1313, gnl|Hg17|chr20 (5126334-5126533) |
|
1100-1313, gnl|loxAfr1|scaffold_23733 (42334-42564) |
|
1100-1313, gnl|mm7|chr2 (132052701-132052926) |
|
1100-1313, gnl|Mm7|chr2 (132052702-132052903) |
|
1100-1313, gnl|oryCun1|scaffold_189921 (86711-86456) |
|
1100-1313, gnl|panTro1|chr21 (5092582-5092802) |
|
1100-1313, gnl|rheMac2|chr10 (38540102-38540316) |
|
1100-1313, gnl|rn3|chr3 (119976229-119976450) |
|
hyp (0.285673) |
|
pgl (0.236967) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
fhi (0.169578) |
|
csp (0.161186) |
|
cli (0.152812) |
|
cag (0.151194) |
|
hlv (0.139256) |
|
cov (0.132153) |
|
cly (0.120642) |
|
eru (0.120048) |
|
jej (0.0989218) |
|
hyp (0.285673) |
|
pgl (0.236967) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
fhi (0.169578) |
|
csp (0.161186) |
|
cli (0.152812) |
|
cag (0.151194) |
|
hlv (0.139256) |
|
cov (0.132153) |
|
cly (0.120642) |
|
eru (0.120048) |
|
jej (0.0989218) |
