Non-Coding RNA Search

Ss1.1-Pig4-TMW8039O03.5

Sequence:


               
               TTTCTGGTAGTTAAATTTAGAGGCTTAATTTGAATCAGGTTCAAATTTCTTGGCAAGAAA
ACTTAGATGGTGTTTTACACTTTCTATTGCATCACATCAGAAGACACCTAATAACTAATT
GTTCCACTTTTAATGATATAAAAATTGGTCACTGGATTTGGGTATTGTGAGCTTGATTTA
TCCATTTTAAAACTCCCTATCTACTTTTTCCCCTAATGATTTTTTTTTAATGGGCACACC
GGAGCGGGAACGCCTTCGGGAAACACAGTCCATTAACAGCAGCTTGTCCACACTGGGGCT
GGTCATCATGGCCTTGAGCAACAAGGAGCCCCATGTGCCTTACCGGAACAGCAAGCTCAC
CTACCTGCTGCAGAACTCTCTGGGTGGCAGCGCTAAGATGCTCATGTTCGTGAACATCTC
CCCCCTGGAAGAGAATGTCTCTGAGTCTCTCAACTCCTTGCGCTTTGCTTCCAAGGTGAA
CCAATGTGTCATTGGTACTGCCCAAGCCAACAAGAAATGAAGACGGATCTAGAGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACACACGGGGAAGGGAGGTGGGTGCGGG
TGCTTTCTTGGTGGGGGGTGCTGTGATATCTGGGCCTATCAAATAAAGAAGAGGTTTTTT
CGCTGTTTTTAAATAAAGGTTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTGGTAGTTAAATTTAGAGGCTTAATTTGAATCAGGTTCAAATTTCTTGGCAAGAAA
ACTTAGATGGTGTTTTACACTTTCTATTGCATCACATCAGAAGACACCTAATAACTAATT
GTTCCACTTTTAATGATATAAAAATTGGTCACTGGATTTGGGTATTGTGAGCTTGATTTA
TCCATTTTAAAACTCCCTATCTACTTTTTCCCCTAATGATTTTTTTTTAATGGGCACACC
GGAGCGGGAACGCCTTCGGGAAACACAGTCCATTAACAGCAGCTTGTCCACACTGGGGCT
GGTCATCATGGCCTTGAGCAACAAGGAGCCCCATGTGCCTTACCGGAACAGCAAGCTCAC
CTACCTGCTGCAGAACTCTCTGGGTGGCAGCGCTAAGATGCTCATGTTCGTGAACATCTC
CCCCCTGGAAGAGAATGTCTCTGAGTCTCTCAACTCCTTGCGCTTTGCTTCCAAGGTGAA
CCAATGTGTCATTGGTACTGCCCAAGCCAACAAGAAATGAAGACGGATCTAGAGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACACACGGGGAAGGGAGGTGGGTGCGGG
TGCTTTCTTGGTGGGGGGTGCTGTGATATCTGGGCCTATCAAATAAAGAAGAGGTTTTTT
CGCTGTTTTTAAATAAAGGTTTTA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               241-660, gnl|bosTau2|chr1 (28456899-28457305)
               

               
               241-660, gnl|Hg17|chr6 (33482157-33485619)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               241-660, gnl|bosTau2|chr1 (28456899-28457305)
               

               
               241-660, gnl|Hg17|chr6 (33482157-33485619)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cmu (0.186393)
               

               
               ill (0.175593)
               

               
               cje (0.165235)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)
               

               
               ill (0.175593)
               

               
               cje (0.165235)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

	241-660, gnl\|bosTau2\|chr1 (28456899-28457305)
	241-660, gnl\|Hg17\|chr6 (33482157-33485619)

	cmu (0.186393)
	ill (0.175593)
	cje (0.165235)
	ecc (0.115035)
	eje (0.0988338)