Non-Coding RNA Search

Ss1.1-Pig4-TMW8039P07.3

Sequence:


               
               GTGCATGGGGAAAAAAAAAAAAAATGTTAATAATTTCATACCAAAATTNTACCCACTTCT
TCTTTGATTCATTTCAGAAGTCATTGTGTGACTTATCAGGCTAATGTGTTGTCATTTTAA
ACCTACCATATGTCTGCAAATCTTTTTGGAGCCCTTAACTATACCAAACAGTGTCAAGTG
CTCCACATGCCTTGACACTTGTAAATCTTGCAACATAATAGTTAGGATCCAGATATCTCC
ATTTTACAGTTTTCCCACAAAGAAACTGAGAAAGAGAGAGCTTGTTACTGCCCAGAACAC
ACTAGGAGGCCAGGAAGAAGAGCCAGGATGAAGCCTCAGATGTCAGTTCCAGGCCGGTGC
TGCTGTGACCTGCTGTGGCTGGTTTTCCCTGGTTGGGGATTCAGGGTCAAAGTAGTGGTC
TTCAGTACATTTGCAGACAGGAACCACGTGCCATTGACATACTGAACTCCTGATGTTTAC
CCATTAATACTAGTGCCCTTGCCAGCCAGCTCGGCTCTCCTGCCCCCTCGGGGCTGTCTT
ACCCGAGGCCAGCAGATGTTCAGCATCCCCTGGCCAGAGACTGCATCTGTGTGGACCATG
GTTGCTTACTGTCTTTAAAACAGTGACACAGAAAATCAGGGGCCTCATTCACAGTACTCA
GGAATCTATGGCCCCCTCCCACTCGTAACCCCTGTAGTTCAGGATAACATGTATTGTTGG
GAATTTGAATTCATTTATATTTCAGGAGCCATGATTTACTTTGGATAAATTCAGATATTA
AACTTATTTTGTAGGAGAGTATGTAATTTGGGATATTTATTATTTACTTATTTTTCTGAG
GTATTTTAAAATAGGCACTTATGGCTCAGAGGGAGTCAAATATGTAGTTCTTACCCTGTT
TTAATGTTTTATTATGATAACATATTAGCATAGGTGATGCTCTTTAAAATGATTGTCTAT
ACTCTGTTCCTTAGTGACCTATATAAAAGACATTTGTGTGCATATTTGGATTGTGTATTG
ATGTCAAGTCAGTTTTAATTTATGCTTTGTAAAGAATCCCTCAAAGGAATTTTTTGATTA
ATAAAAATGTTTATTGTAGAAAATGTGGCAAGTAAAAATAAATATCAAAAAGGAAAATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCATGGGGAAAAAAAAAAAAAATGTTAATAATTTCATACCAAAATTNTACCCACTTCT
TCTTTGATTCATTTCAGAAGTCATTGTGTGACTTATCAGGCTAATGTGTTGTCATTTTAA
ACCTACCATATGTCTGCAAATCTTTTTGGAGCCCTTAACTATACCAAACAGTGTCAAGTG
CTCCACATGCCTTGACACTTGTAAATCTTGCAACATAATAGTTAGGATCCAGATATCTCC
ATTTTACAGTTTTCCCACAAAGAAACTGAGAAAGAGAGAGCTTGTTACTGCCCAGAACAC
ACTAGGAGGCCAGGAAGAAGAGCCAGGATGAAGCCTCAGATGTCAGTTCCAGGCCGGTGC
TGCTGTGACCTGCTGTGGCTGGTTTTCCCTGGTTGGGGATTCAGGGTCAAAGTAGTGGTC
TTCAGTACATTTGCAGACAGGAACCACGTGCCATTGACATACTGAACTCCTGATGTTTAC
CCATTAATACTAGTGCCCTTGCCAGCCAGCTCGGCTCTCCTGCCCCCTCGGGGCTGTCTT
ACCCGAGGCCAGCAGATGTTCAGCATCCCCTGGCCAGAGACTGCATCTGTGTGGACCATG
GTTGCTTACTGTCTTTAAAACAGTGACACAGAAAATCAGGGGCCTCATTCACAGTACTCA
GGAATCTATGGCCCCCTCCCACTCGTAACCCCTGTAGTTCAGGATAACATGTATTGTTGG
GAATTTGAATTCATTTATATTTCAGGAGCCATGATTTACTTTGGATAAATTCAGATATTA
AACTTATTTTGTAGGAGAGTATGTAATTTGGGATATTTATTATTTACTTATTTTTCTGAG
GTATTTTAAAATAGGCACTTATGGCTCAGAGGGAGTCAAATATGTAGTTCTTACCCTGTT
TTAATGTTTTATTATGATAACATATTAGCATAGGTGATGCTCTTTAAAATGATTGTCTAT
ACTCTGTTCCTTAGTGACCTATATAAAAGACATTTGTGTGCATATTTGGATTGTGTATTG
ATGTCAAGTCAGTTTTAATTTATGCTTTGTAAAGAATCCCTCAAAGGAATTTTTTGATTA
ATAAAAATGTTTATTGTAGAAAATGTGGCAAGTAAAAATAAATATCAAAAAGGAAAATGG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               30-1136, gnl|bosTau2|chr14 (11890895-11892001)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-1136, gnl|bosTau2|chr14 (11890895-11892001)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.128733)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.128733)